RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CLK4Q9HAZ1 481 aaKnown RBP13.69□□□□□ -0.22
SF3B5-201ENST00000367569 ZNF223Q9UK11 482 aaPredicted RBP13.69□□□□□ -0.22
SF3B5-201ENST00000367569 SNX6Q9UNH7 406 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 SPACA6W5XKT8 324 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 ZGRF1Q86YA3 2104 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 A0A1W2PR48 441 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 FOXE1O00358 373 aaPredicted RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 CLDN4O14493 209 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 PRKNO60260 465 aaPredicted RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 CRCPO75575 148 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 FAM58BPP0C7Q3 252 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 TPP2P29144 1249 aaPredicted RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 ALDH3A1P30838 453 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 FOLH1Q04609 750 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 BTKQ06187 659 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 GALNT1Q10472 559 aaPredicted RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 EXT1Q16394 746 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 ABHD17BQ5VST6 288 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 DGAT2L6Q6ZPD8 337 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 MAMDC2Q7Z304 686 aaPredicted RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 ZCCHC7Q8N3Z6 543 aaKnown RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 CDC26Q8NHZ8 85 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 AGR3Q8TD06 166 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 ANKRD9Q96BM1 317 aaPredicted RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 PPWD1Q96BP3 646 aaKnown RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 SMC6Q96SB8 1091 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 EBPLQ9BY08 206 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 HES7Q9BYE0 225 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 ALOXE3Q9BYJ1 711 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 ROPN1BQ9BZX4 212 aaPredicted RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 RPF2Q9H7B2 306 aaKnown RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 ROPN1Q9HAT0 212 aaPredicted RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 MMP25Q9NPA2 562 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 ADAP2Q9NPF8 381 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 OXSMQ9NWU1 459 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 LYARQ9NX58 379 aaKnown RBP13.68□□□□□ -0.22
SF3B5-201ENST00000367569 MKS1Q9NXB0 559 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 PHF11Q9UIL8 331 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 SLC5A6Q9Y289 635 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 PLLPQ9Y342 182 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 ASB4Q9Y574 426 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 CREBBPQ92793 2442 aa13.68□□□□□ -0.22
SF3B5-201ENST00000367569 TMEM233B4DJY2 109 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 HRKO00198 91 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 RGS16O15492 202 aaPredicted RBP13.67□□□□□ -0.22
SF3B5-201ENST00000367569 CTNSO60931 367 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 SEMA3DO95025 777 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 MLYCDO95822 493 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 KRT6AP02538 564 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 KRT6BP04259 564 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 CHRNGP07510 517 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 TNNI3P19429 210 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 KRT6CP48668 564 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 PMP22Q01453 160 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 ELOAQ14241 798 aaKnown RBP13.67□□□□□ -0.22
SF3B5-201ENST00000367569 RCN2Q14257 317 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 ZNF169Q14929 603 aaPredicted RBP13.67□□□□□ -0.22
SF3B5-201ENST00000367569 ZNF750Q32MQ0 723 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 CCNYL2Q5T2Q4 361 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 LIPMQ5VYY2 423 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 ZNF787Q6DD87 383 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 MRM1Q6IN84 353 aaKnown RBP13.67□□□□□ -0.22
SF3B5-201ENST00000367569 FAM180BQ6P0A1 224 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 OR1N1Q8NGS0 311 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 RDH11Q8TC12 318 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 M1APQ8TC57 530 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 C5orf34Q96MH7 638 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 GATA5Q9BWX5 397 aaPredicted RBP13.67□□□□□ -0.22
SF3B5-201ENST00000367569 OR8D2Q9GZM6 311 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 CDCP1Q9H5V8 836 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 DDX31Q9H8H2 851 aaKnown RBP13.67□□□□□ -0.22
SF3B5-201ENST00000367569 RRAGDQ9NQL2 400 aaPredicted RBP13.67□□□□□ -0.22
SF3B5-201ENST00000367569 CELSR2Q9HCU4 2923 aa13.67□□□□□ -0.22
SF3B5-201ENST00000367569 CRYBG3Q68DQ2 2970 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 DYTNA2CJ06 578 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 GABRR3A8MPY1 467 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 C17orf105B2RV13 164 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 PGRMC2O15173 223 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 ESRRBO95718 433 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 ICAM2P13598 275 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 BUD31P41223 144 aaPredicted RBP13.66□□□□□ -0.22
SF3B5-201ENST00000367569 TSFMP43897 325 aaKnown RBP13.66□□□□□ -0.22
SF3B5-201ENST00000367569 MAPK12P53778 367 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 PKNOX1P55347 436 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 TAS2R50P59544 299 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 DNAJB13P59910 316 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 TBL3Q12788 808 aaKnown RBP13.66□□□□□ -0.22
SF3B5-201ENST00000367569 ACER2Q5QJU3 275 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 ZNF468Q5VIY5 522 aaPredicted RBP13.66□□□□□ -0.22
SF3B5-201ENST00000367569 METTL4Q8N3J2 472 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 APCDD1LQ8NCL9 501 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 ST6GALNAC3Q8NDV1 305 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 B3GNT7Q8NFL0 401 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 ELP5Q8TE02 316 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 CCDC126Q96EE4 140 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 APIPQ96GX9 242 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 DGAT2Q96PD7 388 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 SIGLEC12Q96PQ1 595 aa13.66□□□□□ -0.22
SF3B5-201ENST00000367569 KLHL1Q9NR64 748 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms