RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SLC39A4Q6P5W5 647 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF767PQ75MW2 155 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 CERS5Q8N5B7 392 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 KIAA0895Q8NCT3 520 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 NPRL2Q8WTW4 380 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ZDHHC1Q8WTX9 485 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 SLC39A7Q92504 469 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 RNF31Q96EP0 1072 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 BOD1Q96IK1 185 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 BMFQ96LC9 184 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 TM9SF3Q9HD45 589 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 NUDT15Q9NV35 164 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 NSG1A0A0A6YYJ2 146 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 RCCD1A6NED2 376 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 IFNA2P01563 188 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 PBX3P40426 434 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 NSG1P42857 185 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 KCNJ8Q15842 424 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF311Q5JNZ3 666 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 HFE2Q6ZVN8 426 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ADGRD2Q7Z7M1 963 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 TPRA1Q86W33 373 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 SLC9A9Q8IVB4 645 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 LSMEM1Q8N8F7 131 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 PSD4Q8NDX1 1056 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 OR2AP1Q8NGE2 309 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 DHRS9Q9BPW9 319 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 SEC22CQ9BRL7 303 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 CACNA1GO43497 2377 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 YDJCA8MPS7 323 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 EFCAB9A8MZ26 197 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ADAM10O14672 748 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 KIAA0355O15063 1070 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 PAPSS1O43252 624 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 H6PDO95479 791 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 IFNA17P01571 189 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 SHBGP04278 402 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ANXA8P13928 327 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 GRIA4P48058 902 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 EMP2P54851 167 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF252P-AS1Q0IIN9 211 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 BNIP3Q12983 259 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ATPAF1Q5TC12 328 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 CLNKQ7Z7G1 428 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 TMEM200AQ86VY9 491 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 KATNAL2Q8IYT4 538 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 PLD5Q8N7P1 536 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 OR10H4Q8NGA5 316 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 OR14L1PQ8NHC6 308 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 CD300LFQ8TDQ1 290 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 BORCS8Q96FH0 119 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ZFP3Q96NJ6 502 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 SLC19A3Q9BZV2 496 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 DDX31Q9H8H2 851 aaKnown RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 SLCO1B3Q9NPD5 702 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 GFRA2O00451 464 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 FADS1O60427 444 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 PRAMEF2O60811 474 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 F2P00734 622 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 RENP00797 406 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 HAPLN1P10915 354 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 SLC2A2P11168 524 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 SLC1A3P43003 542 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 RORCP51449 518 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ARL6IP1Q15041 203 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 CST6Q15828 149 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 PFKFB4Q16877 469 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 CLEC12AQ5QGZ9 265 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 HYIQ5T013 277 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 TMPRSS11BQ86T26 416 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ALYREFQ86V81 257 aaKnown RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 OR6K2Q8NGY2 324 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 RDH11Q8TC12 318 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF599Q96NL3 588 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 FOXN4Q96NZ1 517 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ARRDC1-AS1Q9H2J1 176 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 GSKIPQ9P0R6 139 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ANKMY1Q9P2S6 941 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 A0A1W2PPW3 197 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ELOA3DA6NLF2 546 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF99A8MXY4 864 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 AURKAO14965 403 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 MT-CYBP00156 380 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 TUBG1P23258 451 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 MPIP34949 423 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 CLCNKAP51800 687 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 PLGLAQ15195 96 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ELOA3BQ3SY89 546 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ASTLQ6HA08 431 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 KCTD18Q6PI47 426 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 CBR4Q8N4T8 237 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 SMG8Q8ND04 991 aaKnown RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 ELOA3Q8NG57 546 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 C1orf216Q8TAB5 229 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 SNAPC3Q92966 411 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 TCEAL4Q96EI5 215 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 MMABQ96EY8 250 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 TOE1Q96GM8 510 aaKnown RBP8.3□□□□□ -1.08
SYNE1-206ENST00000367253 FCRL4Q96PJ5 515 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 LYARQ9NX58 379 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms