RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ACTL8Q9H568 366 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 MRPL17Q9NRX2 175 aaKnown RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 PHPT1Q9NRX4 125 aaPredicted RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 IARS2Q9NSE4 1012 aaKnown RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZFP57Q9NU63 452 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 RBM28Q9NW13 759 aaKnown RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 FAM118AQ9NWS6 357 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 PRG3Q9Y2Y8 225 aaPredicted RBP5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 HES2Q9Y543 173 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZFYVE26Q68DK2 2539 aa5.06□□□□□ -1.6
RNU4-39P-201ENST00000362455 DOCK5Q9H7D0 1870 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 KLF18A0A0U1RQI7 1052 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 ARL5CA6NH57 179 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 SDR42E2A6NKP2 422 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 F8VVB4 439 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 F8VWA3 439 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 SLC22A2O15244 555 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 ATP6V0E1O15342 81 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 ADAM12O43184 909 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 NME6O75414 186 aaPredicted RBP5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 TDP2O95551 362 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 BAG2O95816 211 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 CRYAAP02489 173 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 F7P08709 466 aaPredicted RBP5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 IGHV4-31P0DP07 118 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 TDGF1P13385 188 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 CCKARP32238 428 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 CSTF2P33240 577 aaKnown RBP eCLIP5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 FRKP42685 505 aaPredicted RBP5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 STX1BP61266 288 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 CACNG1Q06432 222 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 SULT2A1Q06520 285 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 ARL16Q0P5N6 197 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 HERC3Q15034 1050 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 TAF13Q15543 124 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 RBBP7Q16576 425 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 KBTBD12Q3ZCT8 623 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 ACCSLQ4AC99 568 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 WDR38Q5JTN6 314 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 SLC35D3Q5M8T2 416 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 PODNL1Q6PEZ8 512 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 GDPD4Q6W3E5 623 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 RAPH1Q70E73 1250 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 CATSPER4Q7RTX7 472 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 ITFG1Q8TB96 612 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 KRT35Q92764 455 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 TMEM143Q96AN5 459 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 CENPTQ96BT3 561 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 CCDC43Q96MW1 224 aaKnown RBP5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 GDAP1L1Q96MZ0 367 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 MBOAT7Q96N66 472 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 MAP3K3Q99759 626 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 PLA2G2FQ9BZM2 168 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 OR2B2Q9GZK3 357 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 DHX33Q9H6R0 707 aaKnown RBP5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 SRD5A3Q9H8P0 318 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 AGPAT5Q9NUQ2 364 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 ADPRHL2Q9NX46 363 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 P4HTMQ9NXG6 502 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 SLCO1C1Q9NYB5 712 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 PKD2L2Q9NZM6 624 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 VPS54Q9P1Q0 977 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 FBXL5Q9UKA1 691 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 FRYQ5TBA9 3013 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 ATRXP46100 2492 aa5.05□□□□□ -1.6
RNU4-39P-201ENST00000362455 LAMA4Q16363 1823 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 KIAA1671Q9BY89 1806 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 A0A1W2PRV1 198 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 PRSS46E5RG02 174 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 CCL24O00175 119 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 SLC37A4O43826 429 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 FRMD6-AS1P0C7T7 363 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 CA6P23280 308 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 OR1G1P47890 313 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 GCNT1Q02742 428 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 POU3F1Q03052 451 aaPredicted RBP5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 UBXN1Q04323 297 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 CSTF1Q05048 431 aaKnown RBP5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 LAMTOR4Q0VGL1 99 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF528Q3MIS6 628 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZC2HC1CQ53FD0 456 aaPredicted RBP5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 FAM46CQ5VWP2 391 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 TMEM270Q6UE05 265 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 CD300LGQ6UXG3 332 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 KCTD9Q7L273 389 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 GET4Q7L5D6 327 aaPredicted RBP5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 MIER3Q7Z3K6 550 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 CDR2LQ86X02 465 aaPredicted RBP5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 KLHDC1Q8N7A1 406 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 MGARPQ8TDB4 240 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 TBCKQ8TEA7 893 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 FCAMRQ8WWV6 532 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 FGF13Q92913 245 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 TSACCQ96A04 125 aaPredicted RBP5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 CLDN23Q96B33 292 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 CPB2Q96IY4 423 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 CABS1Q96KC9 395 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 SLC5A7Q9GZV3 580 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 GLT8D2Q9H1C3 349 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF556Q9HAH1 456 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms