RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 PGAM2P15259 253 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 KLHL26Q53HC5 615 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 TCTE1Q5JU00 501 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 PIANPQ8IYJ0 282 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 OR8J3Q8NGG0 315 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 RAB2BQ8WUD1 216 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 EURLQ9NYK6 297 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 PCTPQ9UKL6 214 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 USP3Q9Y6I4 520 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 NUMBLQ9Y6R0 609 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 HCKP08631 526 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 TIMP2P16035 220 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 RPA4Q13156 261 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 TSTQ16762 297 aaKnown RBP17.77■□□□□ 0.43
CLIP2-202ENST00000361545 ATG9BQ674R7 924 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 GNPDA2Q8TDQ7 276 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 DIO2Q92813 273 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 FAM129BQ96TA1 746 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 LPAR4Q99677 370 aa17.77■□□□□ 0.43
CLIP2-202ENST00000361545 ABLIM1O14639 778 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 ERVPABLB-1P60509 514 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 VBP1P61758 197 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 FADDQ13158 208 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 MEP1AQ16819 746 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 LRIT3Q3SXY7 679 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 TANGO2Q6ICL3 276 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 ARHGAP12Q8IWW6 846 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 CLECL1Q8IZS7 167 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 OR5L2Q8NGL0 311 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 OR56A3Q8NH54 315 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 HPS1Q92902 700 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 PRR11Q96HE9 360 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-202ENST00000361545 TOR3AQ9H497 397 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 GPRC5BQ9NZH0 403 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 MKLN1Q9UL63 735 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 MGAT4BQ9UQ53 548 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 LIPT1Q9Y234 373 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 GPR39O43194 453 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 OR2B6P58173 313 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 RAB41Q5JT25 222 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 CES4AQ5XG92 561 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 ZNF551Q7Z340 670 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-202ENST00000361545 COMMD6Q7Z4G1 85 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 ZNF554Q86TJ5 538 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 CD200R1Q8TD46 325 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 NR4A3Q92570 626 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 NPLQ9BXD5 320 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-202ENST00000361545 CA5BQ9Y2D0 317 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 SEC14L5O43304 696 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 GJA8P48165 433 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 GINS1Q14691 196 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 IRF4Q15306 451 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 ZC3H14Q6PJT7 736 aaKnown RBP17.76■□□□□ 0.43
CLIP2-202ENST00000361545 FAM86B1Q8N7N1 296 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 MFSD2AQ8NA29 543 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 FBXL20Q96IG2 436 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 KCNK13Q9HB14 408 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 GJB3O75712 270 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 FARS2O95363 451 aaKnown RBP17.76■□□□□ 0.43
CLIP2-202ENST00000361545 SPARCP09486 303 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 IVDP26440 423 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 CAPZA1P52907 286 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 CDK3Q00526 305 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 CBARPQ8N350 705 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-202ENST00000361545 SLC22A8Q8TCC7 542 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 MND1Q9BWT6 205 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 ASB6Q9NWX5 421 aa17.76■□□□□ 0.43
CLIP2-202ENST00000361545 NKX1-2Q9UD57 310 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-202ENST00000361545 SGCAQ16586 387 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 PAMR1Q6UXH9 720 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 SDR16C5Q8N3Y7 309 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 STARD5Q9NSY2 213 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 SCAMP2O15127 329 aaKnown RBP17.75■□□□□ 0.43
CLIP2-202ENST00000361545 NDUFAF5Q5TEU4 345 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 KIAA1614Q5VZ46 1190 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 ISG20Q96AZ6 181 aaKnown RBP17.75■□□□□ 0.43
CLIP2-202ENST00000361545 ERMAPQ96PL5 475 aaPredicted RBP17.75■□□□□ 0.43
CLIP2-202ENST00000361545 CCL26Q9Y258 94 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 SAGE2PA6NJ88 616 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 RAB36O95755 333 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 ADORA3P0DMS8 318 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 RGRP47804 291 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 ALKAL1Q6UXT8 129 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 PAQR9Q6ZVX9 377 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 OR51G2Q8NGK0 314 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 TSPEARQ8WU66 669 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 DTD2Q96FN9 168 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 ZNF451Q9Y4E5 1061 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 ACOX3O15254 700 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 CLPXO76031 633 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 HTR1AP08908 422 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 RORAP35398 523 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 TMEM31Q5JXX7 168 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 AKAP14Q86UN6 197 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 TMEFF1Q8IYR6 380 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 C16orf78Q8WTQ4 265 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 FBXL8Q96CD0 374 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 DOHHQ9BU89 302 aa17.75■□□□□ 0.43
CLIP2-202ENST00000361545 CLIC3O95833 236 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms