RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TRIM43Q96BQ3 446 aaPredicted RBP19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 FAXDC2Q96IV6 333 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 NUFIP1Q9UHK0 495 aaKnown RBP19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 RAB26Q9ULW5 256 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 C10orf71Q711Q0 1435 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR2AT4A6NND4 320 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 CARM1Q86X55 608 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 C1orf74Q96LT6 269 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 CASD1Q96PB1 797 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 HAPLN2Q9GZV7 340 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 RLN2P04090 185 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 HSD3B2P26439 372 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 PRDX6P30041 224 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 RORAP35398 523 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC10A2Q12908 348 aaPredicted RBP19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 WDR53Q7Z5U6 358 aaPredicted RBP19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 DCDC1P59894 354 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZFP69Q49AA0 526 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 TMEM35AQ53FP2 167 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR2T5Q6IEZ7 315 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR2T29Q8NH02 315 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 KIAA1191Q96A73 305 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 GMLQ99445 158 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 NAA11Q9BSU3 229 aaPredicted RBP19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 RMI1Q9H9A7 625 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 LGALS13Q9UHV8 139 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 LOC100130705A0A1B0GUX0 176 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 RNH1P13489 461 aaKnown RBP19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 VASH1Q7L8A9 365 aaPredicted RBP19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 POP5Q969H6 163 aaKnown RBP19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 LCHNA4D1U4 455 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 CDC14CA4D256 554 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 DCNP07585 359 aaKnown RBP19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 CKMT1AP12532 417 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 DRD1P21728 446 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 GJA8P48165 433 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 POU3F4P49335 361 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 AKR1D1P51857 326 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 CDH15P55291 814 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 ABRAXAS2Q15018 415 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 KIAA0895LQ68EN5 471 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 PHTF2Q8N3S3 785 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 APOOQ9BUR5 198 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 MVB12BQ9H7P6 319 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF821O75541 412 aaPredicted RBP19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 HOXA11P31270 313 aaPredicted RBP19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 PTGR1Q14914 329 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 SHKBP1Q8TBC3 707 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 CIDECQ96AQ7 238 aaPredicted RBP19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC39A1Q9NY26 324 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 MKLN1Q9UL63 735 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 INCA1Q0VD86 236 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 HYAL4Q2M3T9 481 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 MNTQ99583 582 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 PFDN2Q9UHV9 154 aa19.43■□□□□ 0.7
CDC42BPB-201ENST00000361246 AURKAO14965 403 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 CDRT1O95170 752 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 ST3GAL4Q11206 333 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 TEX264Q9Y6I9 313 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 LDB3O75112 727 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 GJB3O75712 270 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 APOC1P02654 83 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 CD53P19397 219 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 GADD45AP24522 165 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 CHRNEQ04844 493 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 C6orf132Q5T0Z8 1188 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC36A4Q6YBV0 504 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 TMED5Q9Y3A6 229 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 NPIPA5A0A0B4J1W7 369 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 HIDE1A8MVS5 230 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 NPIPA7E9PJI5 369 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 SEMA3DO95025 777 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 NPIPA8P0DM63 369 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 PRKCAP17252 672 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 OGFRL1Q5TC84 451 aaPredicted RBP19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 USP43Q70EL4 1123 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 MEX3DQ86XN8 651 aaKnown RBP19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 HUS1BQ8NHY5 278 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 NPRL2Q8WTW4 380 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 STON2Q8WXE9 905 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 HINT2Q9BX68 163 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 TMEM121BQ9BXQ6 578 aaPredicted RBP19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC29A3Q9BZD2 475 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 VSTM2BA6NLU5 285 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 RPS26P11Q5JNZ5 115 aaPredicted RBP19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 TIGD4Q8IY51 512 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 KCTD7Q96MP8 289 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 ATG5Q9H1Y0 275 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF451Q9Y4E5 1061 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 BCKDHAP12694 445 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 GRB7Q14451 532 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR8H3Q8N146 312 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 SYNPOQ8N3V7 929 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC7A11Q9UPY5 501 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 CACNA1FO60840 1977 aa19.42■□□□□ 0.7
CDC42BPB-201ENST00000361246 SH3PXD2BA1X283 911 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR5K4A6NMS3 321 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 PTGESO14684 152 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 RAD1O60671 282 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms