RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CXorf36Q9H7Y0 433 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 NMNAT1Q9HAN9 279 aaPredicted RBP10.65□□□□□ -0.7
SSU72-202ENST00000359060 RLIMQ9NVW2 624 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 SAGE1Q9NXZ1 904 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 SLC23A2Q9UGH3 650 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 TMEFF2Q9UIK5 374 aaPredicted RBP10.65□□□□□ -0.7
SSU72-202ENST00000359060 SSR3Q9UNL2 185 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 PCDHGA10Q9Y5H3 936 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 PRAMEF33A0A0G2JMD5 474 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 LOC110117498-PIK3R3F6TDL0 507 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 FOXE1O00358 373 aaPredicted RBP10.65□□□□□ -0.7
SSU72-202ENST00000359060 PCDHGA12O60330 932 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 MPZL2O60487 215 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 PRAMEF10O60809 474 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 ASGR2P07307 311 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 CTSEP14091 401 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 HOXB2P14652 356 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 DDCP20711 480 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 GADD45AP24522 165 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 NOS3P29474 1203 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 GJA4P35212 333 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 RAB28P51157 221 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 CRISP1P54107 249 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 MESP2Q0VG99 397 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 ITPRIPL2Q3MIP1 535 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 USP30Q70CQ3 517 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 IQCHQ86VS3 1027 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 SFTPA1Q8IWL2 248 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 SLC30A8Q8IWU4 369 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 TTLQ8NG68 377 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 RERGQ96A58 199 aaPredicted RBP10.65□□□□□ -0.7
SSU72-202ENST00000359060 ACOT13Q9NPJ3 140 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 PRSS16Q9NQE7 514 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 SNTG1Q9NSN8 517 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 ARID1BQ8NFD5 2236 aaPredicted RBP10.65□□□□□ -0.7
SSU72-202ENST00000359060 LRRC72A6NJI9 287 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 CAPNS1P04632 268 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 MRPS15P82914 257 aaKnown RBP10.65□□□□□ -0.71
SSU72-202ENST00000359060 ZNF404Q494X3 552 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 TMEM240Q5SV17 173 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 ALDH16A1Q8IZ83 802 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 SYNPOQ8N3V7 929 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 DRAXINQ8NBI3 349 aaPredicted RBP10.65□□□□□ -0.71
SSU72-202ENST00000359060 FAR1Q8WVX9 515 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 TRUB1Q8WWH5 349 aaKnown RBP10.65□□□□□ -0.71
SSU72-202ENST00000359060 MTERF3Q96E29 417 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 CHFRQ96EP1 664 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 NIPSNAP1Q9BPW8 284 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 SFXN1Q9H9B4 322 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 ZNF639Q9UID6 485 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 MSRAQ9UJ68 235 aa10.65□□□□□ -0.71
SSU72-202ENST00000359060 SMIM30A4D0T7 59 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 YY2O15391 372 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 DNAJB5O75953 348 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 ZNF10P21506 573 aaPredicted RBP10.64□□□□□ -0.71
SSU72-202ENST00000359060 NT5EP21589 574 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 RNF144AP50876 292 aaPredicted RBP10.64□□□□□ -0.71
SSU72-202ENST00000359060 ZNF311Q5JNZ3 666 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 TMEM107Q6UX40 140 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 IGFN1Q86VF2 1251 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 KLHDC8AQ8IYD2 350 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 ZNF784Q8NCA9 323 aaPredicted RBP10.64□□□□□ -0.71
SSU72-202ENST00000359060 FAM46DQ8NEK8 389 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 COQ10AQ96MF6 247 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 CAMK1GQ96NX5 476 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 LGR4Q9BXB1 951 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 TEX10Q9NXF1 929 aaPredicted RBP10.64□□□□□ -0.71
SSU72-202ENST00000359060 CPSF4LA6NMK7 179 aaKnown RBP10.64□□□□□ -0.71
SSU72-202ENST00000359060 CLCA1A8K7I4 914 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 PRKRAO75569 313 aaKnown RBP10.64□□□□□ -0.71
SSU72-202ENST00000359060 GGT2P36268 569 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 MLLT10P55197 1068 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 SYPL1Q16563 259 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 OR4C11Q6IEV9 310 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 USP43Q70EL4 1123 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 CDK20Q8IZL9 346 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 IQCF1Q8N6M8 205 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 KLHL6Q8WZ60 621 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 RAB11FIP5Q9BXF6 653 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 ABCG4Q9H172 646 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 CCDC88CQ9P219 2028 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 C17orf113A0A1B0GUU1 675 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 RPA4Q13156 261 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 PTGES3Q15185 160 aaKnown RBP10.64□□□□□ -0.71
SSU72-202ENST00000359060 DUSP7Q16829 419 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 KLHL12Q53G59 568 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 MFSD4BQ5TF39 518 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 PJA1Q8NG27 643 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 MGLLQ99685 303 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 SLC35C2Q9NQQ7 365 aa10.64□□□□□ -0.71
SSU72-202ENST00000359060 TRBV5-3A0A0A0MS03 114 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 PLPP1O14494 284 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 FRS3O43559 492 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 OR10H2O60403 315 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 MOSPD3O75425 235 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 CPNE6O95741 557 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 ALPPP05187 535 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 ARAFP10398 606 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 RPS21P63220 83 aaKnown RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 SFSWAPQ12872 951 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms