RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TECPR1Q7Z6L1 1165 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 DDX53Q86TM3 631 aaKnown RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 FAM26EQ8N5C1 309 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 OR5AK3PQ8NH89 298 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 SLC5A11Q8WWX8 675 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 OR5P2Q8WZ92 322 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 ISYNA1Q9NPH2 558 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 SPG21Q9NZD8 308 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 MUTYHQ9UIF7 546 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 KIF26AQ9ULI4 1882 aaPredicted RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 MEIOCA2RUB1 952 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 LEFTY2O00292 366 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 KLHL18O94889 574 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 MFN2O95140 757 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 SOX3P41225 446 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 CLPPQ16740 277 aaPredicted RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 NXNL2Q5VZ03 156 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 CEACAM20Q6UY09 585 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 GAREM2Q75VX8 874 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 DPPA4Q7L190 304 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 TMCO2Q7Z6W1 182 aaPredicted RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 PHC2Q8IXK0 858 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 WDR48Q8TAF3 677 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 SETD7Q8WTS6 366 aaKnown RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 ZNF764Q96H86 408 aaPredicted RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 SAMD11Q96NU1 681 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 IL4I1Q96RQ9 567 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 POLDIP3Q9BY77 421 aaKnown RBP16.85■□□□□ 0.29
RTN4-204ENST00000357732 SLC6A16Q9GZN6 736 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 SLA2Q9H6Q3 261 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 C11orf16Q9NQ32 467 aa16.85■□□□□ 0.29
RTN4-204ENST00000357732 STK25O00506 426 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 TGFB1P01137 390 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 CXCL10P02778 98 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 CPEP16870 476 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 GSTM5P46439 218 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 CYP27C1Q4G0S4 372 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 C6orf183Q5T699 404 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 LAX1Q8IWV1 398 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 GPR65Q8IYL9 337 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 C17orf50Q8WW18 174 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 AP3S1Q92572 193 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 ZNF354BQ96LW1 612 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 TSSK6Q9BXA6 273 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 SNTG1Q9NSN8 517 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 FAM8A1Q9UBU6 413 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 HCN2Q9UL51 889 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 SNX11Q9Y5W9 270 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 ANKRD34BA5PLL1 514 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 FAM25AB3EWG3 89 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 FAM25CB3EWG5 89 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 FAM25GB3EWG6 89 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 HOXC11O43248 304 aaPredicted RBP16.84■□□□□ 0.29
RTN4-204ENST00000357732 HBQ1P09105 142 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 GJA1P17302 382 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 HOXD10P28358 340 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 BAK1Q16611 211 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 TCTN3Q6NUS6 607 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 RDH10Q8IZV5 341 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 SLC39A11Q8N1S5 342 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 VWA5B2Q8N398 1253 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 OR9A1PQ8NGU1 263 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 GRPEL2Q8TAA5 225 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 CREB3L4Q8TEY5 395 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 LRIG1Q96JA1 1093 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 DEPDC7Q96QD5 511 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 ZNF607Q96SK3 696 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 ZCCHC2Q9C0B9 1178 aaKnown RBP16.84■□□□□ 0.29
RTN4-204ENST00000357732 POLR2J3Q9H1A7 115 aaKnown RBP16.84■□□□□ 0.29
RTN4-204ENST00000357732 OR51B5Q9H339 312 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.84■□□□□ 0.291e-7■■□□□ 12.1
RTN4-204ENST00000357732 TAAR2Q9P1P5 351 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 DKK3Q9UBP4 350 aa16.84■□□□□ 0.29
RTN4-204ENST00000357732 A0A1W2PQ09 198 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 CCDC182A6NF36 153 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 OR10H3O60404 316 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 MMP20O60882 483 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 RAB36O95755 333 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 CYP17A1P05093 508 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 KLK1P06870 262 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 IL3P08700 152 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 MLLT3P42568 568 aaPredicted RBP16.83■□□□□ 0.28
RTN4-204ENST00000357732 DOC2BQ14184 412 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 SLC38A5Q8WUX1 472 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 ZNF558Q96NG5 402 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 NEDD4LQ96PU5 975 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 FUZQ9BT04 418 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 SMG9Q9H0W8 520 aaKnown RBP16.83■□□□□ 0.28
RTN4-204ENST00000357732 CXorf36Q9H7Y0 433 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 MRPS18AQ9NVS2 196 aaKnown RBP16.83■□□□□ 0.28
RTN4-204ENST00000357732 DNAJC27Q9NZQ0 273 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 RHCGQ9UBD6 479 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 CLEC2DQ9UHP7 191 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 DOCK6Q96HP0 2047 aa16.83■□□□□ 0.28
RTN4-204ENST00000357732 H3BN98 237 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 TRIM3O75382 744 aaPredicted RBP16.82■□□□□ 0.28
RTN4-204ENST00000357732 ALPPP05187 535 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 YES1P07947 543 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 DDCP20711 480 aa16.82■□□□□ 0.28
RTN4-204ENST00000357732 KCNJ5P48544 419 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms