RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 HNRNPA2B1P22626 353 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 CD6P30203 668 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 MAT2AP31153 395 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 GPC1P35052 558 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 LIPAP38571 399 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 RFX2P48378 723 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 CRISP3P54108 245 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PFN3P60673 137 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 RAPSNQ13702 412 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 ELOAQ14241 798 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 RPS6KA2Q15349 733 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 KIAA0895LQ68EN5 471 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 USP51Q70EK9 711 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 FBXO39Q8N4B4 442 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PTGR2Q8N8N7 351 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 TMEM145Q8NBT3 493 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 FANK1Q8TC84 345 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PNPT1Q8TCS8 783 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PHF10Q8WUB8 498 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 BMFQ96LC9 184 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 ZNF300Q96RE9 604 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 TRMOQ9BU70 441 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 INTS7Q9NVH2 962 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 MALT1Q9UDY8 824 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 HS3ST3A1Q9Y663 406 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PLXND1Q9Y4D7 1925 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 IGHV1OR15-9A0A0B4J2B8 117 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 MGAT4DA6NG13 374 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 SUPT3HB4E1H0 165 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PSIP1O75475 530 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 GPIP06744 558 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 GRK5P34947 590 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 MAPK9P45984 424 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 MVKQ03426 396 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 C2orf80Q0P641 193 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 ABRQ12979 859 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 CSTF3Q12996 717 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 GPR50Q13585 617 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 BOP1Q14137 746 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PFKFB4Q16877 469 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 TMEM31Q5JXX7 168 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 LAIR1Q6GTX8 287 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 KLHL17Q6TDP4 642 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 LACC1Q8IV20 430 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 UBTD2Q8WUN7 234 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 DPCDQ9BVM2 203 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 DPEP2Q9H4A9 486 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 C6orf106Q9H6K1 298 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 RANBP3Q9H6Z4 567 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 ABCB9Q9NP78 766 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 EXOSC4Q9NPD3 245 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 ADGRE2Q9UHX3 823 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 CYP8B1Q9UNU6 501 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 RPH3AQ9Y2J0 694 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 A0A096LPI6 279 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 SLC31A1O15431 190 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 FFAR2O15552 330 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 POP7O75817 140 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 C21orf33P30042 268 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 MXD1Q05195 221 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 TRAP1Q12931 704 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 MTAPQ13126 283 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PRKAA1Q13131 559 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 RPA4Q13156 261 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 DAG1Q14118 895 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PCBP2Q15366 365 aaKnown RBP eCLIP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 GCNT7Q6ZNI0 430 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 LRRTM4Q86VH4 590 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 ZDHHC13Q8IUH4 622 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 TRAPPC5Q8IUR0 188 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 MIER2Q8N344 545 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 LILRA3Q8N6C8 439 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 PACRGLQ8N7B6 248 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 COQ8BQ96D53 544 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 REXO5Q96IC2 774 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 ORAI3Q9BRQ5 295 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 FZD3Q9NPG1 666 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 RDH8Q9NYR8 311 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 CCDC59Q9P031 241 aaKnown RBP9.63□□□□□ -0.87
SYNE1-203ENST00000354674 SIT1Q9Y3P8 196 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 A0A0B4J293 547 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 A0A1W2PP18 115 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 POM121BA6NF01 834 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 POM121CA8CG34 1229 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 G3V2T6 193 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 OR5F1O95221 314 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 GSK3BP49841 420 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 LIPEQ05469 1076 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 RUNDC3AQ59EK9 446 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 FUNDC1Q8IVP5 155 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 CACTIN-AS1Q8N1I8 211 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 FBXO15Q8NCQ5 510 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-203ENST00000354674 DNAJB8Q8NHS0 232 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 TMEM159Q96B96 161 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 RHBDF1Q96CC6 855 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 RNF31Q96EP0 1072 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 FOPNLQ96NB1 174 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 PCED1AQ9H1Q7 454 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms