RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 CDH3P22223 829 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 OPRD1P41143 372 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 OLR1P78380 273 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 HSPB3Q12988 150 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 USP43Q70EL4 1123 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 MCFD2Q8NI22 146 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 HERVK_113Q902F9 699 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 RSPO3Q9BXY4 272 aaPredicted RBP21.01■□□□□ 0.95
UPF3A-201ENST00000351487 TEX101Q9BY14 249 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 MMP27Q9H306 513 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 DDX31Q9H8H2 851 aaKnown RBP21.01■□□□□ 0.95
UPF3A-201ENST00000351487 MS4A12Q9NXJ0 267 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 GIN1Q9NXP7 522 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 SLC6A14Q9UN76 642 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 EFCAB10A6NFE3 127 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 RPLP0P05388 317 aaKnown RBP21.01■□□□□ 0.95
UPF3A-201ENST00000351487 LIMK1P53667 647 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 TAS2R38P59533 333 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 TRA2BP62995 288 aaKnown RBP21.01■□□□□ 0.95
UPF3A-201ENST00000351487 AGERQ15109 404 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 UBE3DQ7Z6J8 389 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 LINC01555Q8NAE3 123 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 B3GNT7Q8NFL0 401 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 FGF13Q92913 245 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 CDCA4Q9BXL8 241 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 IRAK4Q9NWZ3 460 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 TEX10Q9NXF1 929 aaPredicted RBP21.01■□□□□ 0.95
UPF3A-201ENST00000351487 OBP2AQ9NY56 170 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 TAS2R7Q9NYW3 318 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 C5AR2Q9P296 337 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 ACSL5Q9ULC5 683 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 PNMA8BQ9ULN7 279 aaPredicted RBP21.01■□□□□ 0.95
UPF3A-201ENST00000351487 TRBV4-1A0A0J9YWV2 114 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 METTL15A6NJ78 407 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 M0R129 80 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 OXSR1O95747 527 aaPredicted RBP21■□□□□ 0.95
UPF3A-201ENST00000351487 CLCNKAP51800 687 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 DMPKQ09013 629 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 ZNF404Q494X3 552 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 AGBL4Q5VU57 503 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 KIAA1161Q6NSJ0 714 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 ZNF367Q7RTV3 350 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 RASSF5Q8WWW0 418 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 EXOSC8Q96B26 276 aaKnown RBP21■□□□□ 0.95
UPF3A-201ENST00000351487 ZDHHC4Q9NPG8 344 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 NDOR1Q9UHB4 597 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 DOLKQ9UPQ8 538 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 ANTXRLA6NF34 631 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 SEMA7AO75326 666 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 CSNK1G2P78368 415 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 SPDYE7PQ495Y7 208 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 TCTN3Q6NUS6 607 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 ADGRD2Q7Z7M1 963 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 SLC44A2Q8IWA5 706 aaPredicted RBP21■□□□□ 0.95
UPF3A-201ENST00000351487 RAB8BQ92930 207 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 ERLEC1Q96DZ1 483 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 ACAD8Q9UKU7 415 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 ZBTB32Q9Y2Y4 487 aaPredicted RBP21■□□□□ 0.95
UPF3A-201ENST00000351487 PCDHGA3Q9Y5H0 932 aa21■□□□□ 0.95
UPF3A-201ENST00000351487 MYO10Q9HD67 2058 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 A0A0A6YYD5 115 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 OR1F1O43749 312 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 CLEC3AO75596 197 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 ELAVL4P26378 380 aaKnown RBP20.99■□□□□ 0.95
UPF3A-201ENST00000351487 TEAD1P28347 426 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 CNR2P34972 360 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 KCNJ5P48544 419 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 PERM1Q5SV97 790 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 RAB42Q8N4Z0 105 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 ZNF354BQ96LW1 612 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 SERHL2Q9H4I8 314 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 REV1Q9UBZ9 1251 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 DOCK9Q9BZ29 2069 aa20.99■□□□□ 0.95
UPF3A-201ENST00000351487 TMEM247A6NEH6 219 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 FAM227AF5H4B4 570 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 PIPP12273 146 aaPredicted RBP20.98■□□□□ 0.95
UPF3A-201ENST00000351487 CD40LGP29965 261 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 GRK5P34947 590 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 SLC15A1P46059 708 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 CCT3P49368 545 aaKnown RBP20.98■□□□□ 0.95
UPF3A-201ENST00000351487 RGS6P49758 472 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 ARMCX4Q5H9R4 360 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 TOR1AIP1Q5JTV8 583 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 NLGN4XQ8N0W4 816 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 FAM46DQ8NEK8 389 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 KBTBD8Q8NFY9 601 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 ZNF607Q96SK3 696 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 NEURL2Q9BR09 285 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 NXF2Q9GZY0 626 aaKnown RBP20.98■□□□□ 0.95
UPF3A-201ENST00000351487 TRPV4Q9HBA0 871 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 CLN6Q9NWW5 311 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 TMCC3Q9ULS5 477 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 MGAT4BQ9UQ53 548 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 CKAP5Q14008 2032 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 ATG2AQ2TAZ0 1938 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 ANHXE9PGG2 379 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 FAAHO00519 579 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 OSMP13725 252 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 TGM1P22735 817 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 FCARP24071 287 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms