RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 EN2P19622 333 aaPredicted RBP14.66□□□□□ -0.06
UPF3B-202ENST00000345865 PTGER1P34995 402 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 HSD17B2P37059 387 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 ATP1A4Q13733 1029 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 KIAA1161Q6NSJ0 714 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 ZNF793Q6ZN11 406 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 SNX29P2Q8IUI4 249 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 C7orf61Q8IZ16 206 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 HDDC3Q8N4P3 179 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 COX4I2Q96KJ9 171 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 PSD2Q9BQI7 771 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 ITPAQ9BY32 194 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 RSPH9Q9H1X1 276 aaPredicted RBP14.66□□□□□ -0.06
UPF3B-202ENST00000345865 KLHL31Q9H511 634 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 ARMC7Q9H6L4 198 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 SFXN1Q9H9B4 322 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 FAM32AQ9Y421 112 aaKnown RBP14.66□□□□□ -0.06
UPF3B-202ENST00000345865 USP34Q70CQ2 3546 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 C4orf51C9J302 202 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 SERPIND1P05546 499 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 CRISP3P54108 245 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 SEC23BQ15437 767 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 TBCEQ15813 527 aaPredicted RBP14.65□□□□□ -0.06
UPF3B-202ENST00000345865 LEXMQ3ZCV2 418 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 COMTD1Q86VU5 262 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 NUDT13Q86X67 352 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 CHPT1Q8WUD6 406 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 RGMAQ96B86 450 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 C17orf62Q9BQA9 187 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 SLIRPQ9GZT3 109 aaKnown RBP14.65□□□□□ -0.06
UPF3B-202ENST00000345865 PCBD2Q9H0N5 130 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 NT5DC2Q9H857 520 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 TBCCD1Q9NVR7 557 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 GDE1Q9NZC3 331 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 FTSJ1Q9UET6 329 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 MYO9BQ13459 2157 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 PRR23AA6NEV1 266 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 CLDN24A6NM45 220 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 SCAMP1O15126 338 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 CHMP24386 653 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 GRK5P34947 590 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 IFITM3Q01628 133 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 KCNC4Q03721 635 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 PRDX1Q06830 199 aaKnown RBP14.65□□□□□ -0.06
UPF3B-202ENST00000345865 TCTN3Q6NUS6 607 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 OLIG3Q7RTU3 272 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 ADCK2Q7Z695 626 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 MFSD4AQ8N468 514 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 DENND6BQ8NEG7 585 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 SLC38A4Q969I6 547 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 CAMK1GQ96NX5 476 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 DDX31Q9H8H2 851 aaKnown RBP14.65□□□□□ -0.06
UPF3B-202ENST00000345865 SYNPO2LQ9H987 977 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 ZNF556Q9HAH1 456 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 NEUROD4Q9HD90 331 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 IMP3Q9NV31 184 aaKnown RBP14.65□□□□□ -0.06
UPF3B-202ENST00000345865 OBP2AQ9NY56 170 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 TAS2R16Q9NYV7 291 aa14.65□□□□□ -0.06
UPF3B-202ENST00000345865 WBP11Q9Y2W2 641 aaKnown RBP14.65□□□□□ -0.06
UPF3B-202ENST00000345865 A0A0A6YYD5 115 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 LRIT2A6NDA9 550 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 OR52A4PA6NMU1 304 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 C5orf58C9J3I9 102 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 CCT3P49368 545 aaKnown RBP14.64□□□□□ -0.07
UPF3B-202ENST00000345865 TP53BP2Q13625 1128 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 SYPL1Q16563 259 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 OR4C11Q6IEV9 310 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 LACC1Q8IV20 430 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 SLC30A8Q8IWU4 369 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 OR5D16Q8NGK9 328 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 DPH7Q9BTV6 452 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 ZBTB20Q9HC78 741 aaPredicted RBP14.64□□□□□ -0.07
UPF3B-202ENST00000345865 MS4A12Q9NXJ0 267 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 ACSL5Q9ULC5 683 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 B3GNT3Q9Y2A9 372 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 MDC1Q14676 2089 aaKnown RBP14.64□□□□□ -0.07
UPF3B-202ENST00000345865 GLOD5A6NK44 160 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 ZAR1LA6NP61 321 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 EFCAB9A8MZ26 197 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 ANHXE9PGG2 379 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 PTHP01270 115 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 IGFBP1P08833 259 aaPredicted RBP14.64□□□□□ -0.07
UPF3B-202ENST00000345865 BMP4P12644 408 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 CTSKP43235 329 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 SOX9P48436 509 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 DMPKQ09013 629 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 ST3GAL4Q11206 333 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 ENPP2Q13822 863 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 DOC2BQ14184 412 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 ZNF846Q147U1 533 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 AGERQ15109 404 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 DGUOKQ16854 277 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 TIGD6Q17RP2 521 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 SPDYE7PQ495Y7 208 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 FRMPD2BQ6IN97 320 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 MYDGFQ969H8 173 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 OTUB1Q96FW1 271 aaPredicted RBP14.64□□□□□ -0.07
UPF3B-202ENST00000345865 KXD1Q9BQD3 176 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 GLIPR2Q9H4G4 154 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms