RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 REPS1Q96D71 796 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 DGAT2Q96PD7 388 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 PLSCR2Q9NRY7 297 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 MYOTQ9UBF9 498 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 COPS7AQ9UBW8 275 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 VTI1BQ9UEU0 232 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 PCDHGA11Q9Y5H2 935 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 DNAJC13O75165 2243 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 PKDREJQ9NTG1 2253 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 ZNF407Q9C0G0 2248 aa11.52□□□□□ -0.56
SGCA-202ENST00000344627 POC1B-GALNT4F8VUJ3 575 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 OR6B1O95007 311 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 SIX3O95343 332 aaPredicted RBP11.52□□□□□ -0.57
SGCA-202ENST00000344627 TUBB4AP04350 444 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 MTHFD2P13995 350 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 CD1EP15812 388 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 PTX3P26022 381 aaPredicted RBP11.52□□□□□ -0.57
SGCA-202ENST00000344627 PIK3CGP48736 1102 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 GPR143P51810 404 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 ALDH18A1P54886 795 aaKnown RBP11.52□□□□□ -0.57
SGCA-202ENST00000344627 SETDB1Q15047 1291 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 NDUFAF5Q5TEU4 345 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 LIPJQ5W064 366 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 CYP20A1Q6UW02 462 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 TAOK1Q7L7X3 1001 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 GPR180Q86V85 440 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 MNS1Q8NEH6 495 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 OR5L2Q8NGL0 311 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 OR8K3Q8NH51 312 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 LILRB4Q8NHJ6 448 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 UHMK1Q8TAS1 419 aaKnown RBP11.52□□□□□ -0.57
SGCA-202ENST00000344627 RND1Q92730 232 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 SDCCAG3Q96C92 435 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 TRIM44Q96DX7 344 aaPredicted RBP11.52□□□□□ -0.57
SGCA-202ENST00000344627 PHF21BQ96EK2 531 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 TSPYL1Q9H0U9 437 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 DEFB127Q9H1M4 99 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 RPF2Q9H7B2 306 aaKnown RBP11.52□□□□□ -0.57
SGCA-202ENST00000344627 IPPKQ9H8X2 491 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 DMRT3Q9NQL9 472 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 CLDN16Q9Y5I7 305 aa11.52□□□□□ -0.57
SGCA-202ENST00000344627 TNPO3Q9Y5L0 923 aaKnown RBP11.52□□□□□ -0.57
SGCA-202ENST00000344627 CACNA1CQ13936 2221 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 A0A1B0GTH9 108 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 HMX2A2RU54 273 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 G3V3Y1 287 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 ADAM10O14672 748 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 BCKDKO14874 412 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 OR10H2O60403 315 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 SMIM24O75264 130 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 ETHE1O95571 254 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 TPOP07202 933 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 HOXD4P09016 255 aaPredicted RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 BUD31P41223 144 aaPredicted RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 SOX3P41225 446 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 PIK3CBP42338 1070 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 KIR3DL1P43629 444 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 CCNG1P51959 295 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 HK2P52789 917 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 PPIAP62937 165 aaKnown RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 RNF4P78317 190 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 TLE4Q04727 773 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 ZNF750Q32MQ0 723 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 UBAP2Q5T6F2 1119 aaKnown RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 C18orf63Q68DL7 685 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 TTC19Q6DKK2 380 aaPredicted RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 MEX3BQ6ZN04 569 aaKnown RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 GOLGA7Q7Z5G4 137 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 CDH24Q86UP0 819 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 CHERPQ8IWX8 916 aaKnown RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 PTGR2Q8N8N7 351 aaPredicted RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 PSD4Q8NDX1 1056 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 DOK4Q8TEW6 326 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 ANKRD9Q96BM1 317 aaPredicted RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 PPWD1Q96BP3 646 aaKnown RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 RBM18Q96H35 190 aaKnown RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 SGCZQ96LD1 299 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 RASL10BQ96S79 203 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 FMO2Q99518 471 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 CDC42EP4Q9H3Q1 356 aaKnown RBP11.51□□□□□ -0.57
SGCA-202ENST00000344627 ACSS3Q9H6R3 686 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 KCNJ16Q9NPI9 418 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 ZNF358Q9NW07 568 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 MS4A12Q9NXJ0 267 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 KCNN3Q9UGI6 736 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 PHF11Q9UIL8 331 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 EDARQ9UNE0 448 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 RNF11Q9Y3C5 154 aa11.51□□□□□ -0.57
SGCA-202ENST00000344627 NINQ8N4C6 2090 aa11.5□□□□□ -0.57
SGCA-202ENST00000344627 CSMD2Q7Z408 3487 aa11.5□□□□□ -0.57
SGCA-202ENST00000344627 CCDC189A1A4V9 331 aa11.5□□□□□ -0.57
SGCA-202ENST00000344627 GLOD5A6NK44 160 aa11.5□□□□□ -0.57
SGCA-202ENST00000344627 TMEM200CA6NKL6 621 aa11.5□□□□□ -0.57
SGCA-202ENST00000344627 FAM166BA8MTA8 275 aa11.5□□□□□ -0.57
SGCA-202ENST00000344627 PLPP1O14494 284 aa11.5□□□□□ -0.57
SGCA-202ENST00000344627 FGF17O60258 216 aa11.5□□□□□ -0.57
SGCA-202ENST00000344627 PRKRAO75569 313 aaKnown RBP11.5□□□□□ -0.57
SGCA-202ENST00000344627 ALDOAP04075 364 aaKnown RBP11.5□□□□□ -0.57
SGCA-202ENST00000344627 RBP1P09455 135 aa11.5□□□□□ -0.57
SGCA-202ENST00000344627 CTAGE8P0CG41 777 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms