RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 LYSMD3Q7Z3D4 306 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CELF5Q8N6W0 485 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 OR5AP2Q8NGF4 316 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SDCBP2Q9H190 292 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PCDHB10Q9UN67 800 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PKP3Q9Y446 797 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PCDHB9Q9Y5E1 797 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 NKRFO15226 690 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TATP17735 454 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 LINGO4Q6UY18 593 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF438Q7Z4V0 828 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ELP4Q96EB1 424 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 OR52B2Q96RD2 323 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CDADC1Q9BWV3 514 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 POPDC2Q9HBU9 364 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 WFDC1Q9HC57 220 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PLSCR2Q9NRY7 297 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GAB2Q9UQC2 676 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 IQCMA0A1B0GVH7 501 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TVP23AA6NH52 213 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SLC16A6O15403 523 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 OR1I1O60431 355 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DCNP07585 359 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 G6PDP11413 515 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TIMP2P16035 220 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RAD52P43351 418 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GPR33Q49SQ1 333 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TDRD10Q5VZ19 366 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 AMIGO2Q86SJ2 522 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DPF2Q92785 391 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MEGF6O75095 1541 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GGT3PA6NGU5 568 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HMSDA8MTL9 139 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CST2P09228 141 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SCGB1A1P11684 91 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GGT2P36268 569 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TECP42680 631 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 OR10A3P58181 314 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GPR68Q15743 365 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ATP6AP1Q15904 470 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF239Q16600 458 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PDZD11Q5EBL8 140 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DTD1Q8TEA8 209 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 UBXN10Q96LJ8 280 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SAP130Q9H0E3 1048 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DNMT3LQ9UJW3 386 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MAPTP10636 758 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF37AP17032 561 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 RAB39AQ14964 217 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 MOXD1Q6UVY6 613 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 GALNT10Q86SR1 603 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SLC15A4Q8N697 577 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 RXFP2Q8WXD0 754 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 PSMG2Q969U7 264 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ACOT13Q9NPJ3 140 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CNOT2Q9NZN8 540 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CTSFQ9UBX1 484 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 MADDQ8WXG6 1647 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NPHP3-ACAD11A0A0J9YXS1 232 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 MEIOCA2RUB1 952 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 INMT-MINDY4F8WBC2 141 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 TNFRSF10BO14763 440 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 F2P00734 622 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CD1BP29016 333 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF311Q5JNZ3 666 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 PLBD2Q8NHP8 589 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 WASF2Q9Y6W5 498 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM189-UBE2V1I3L0A0 370 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SMAD9O15198 467 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 PDYNP01213 254 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF888P0CJ79 500 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 GCH1P30793 250 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 AKAP6Q13023 2319 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 RTL4Q6ZR62 310 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 C15orf54Q8N8G6 183 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZSCAN10Q96SZ4 725 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SPATA6Q9NWH7 488 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 MTHFD2P13995 350 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ITGB8P26012 769 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CD47Q08722 323 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CRY2Q49AN0 593 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 OR2G6Q5TZ20 316 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 FBXW12Q6X9E4 464 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 LYSMD2Q8IV50 215 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ABRAQ8N0Z2 381 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SPPL3Q8TCT6 385 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 RSC1A1Q92681 617 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CPVLQ9H3G5 476 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF33AQ06730 810 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 IL24Q13007 206 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZDHHC24Q6UX98 284 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NECAP1Q8NC96 275 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 OSTF1Q92882 214 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SHDQ96IW2 340 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 GAR1Q9NY12 217 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SLC22A7Q9Y694 548 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 GPR25O00155 361 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZBTB7AO95365 584 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 GNA15P30679 374 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CHRNA4P43681 627 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms