RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 P2RY13Q9BPV8 354 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 MS4A7Q9GZW8 240 aaPredicted RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 MAGEH1Q9H213 219 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 CHST8Q9H2A9 424 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 ZFYVE1Q9HBF4 777 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 C1orf226A1L170 272 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 SCAMP2O15127 329 aaKnown RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 SH3BP5O60239 455 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 SERPINI2O75830 405 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 CFDP00746 253 aaPredicted RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 CD9P21926 228 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 HMGB2P26583 209 aaKnown RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 PXNP49023 591 aaPredicted RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 STK19P49842 368 aaPredicted RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 LIM2P55344 173 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 MLLT11Q13015 90 aaPredicted RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 EXOSC2Q13868 293 aaKnown RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 HEPACAMQ14CZ8 416 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 HSDL2Q6YN16 418 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 GDPGP1Q6ZNW5 385 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 ZNF280BQ86YH2 543 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 SLC30A8Q8IWU4 369 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 FAM9CQ8IZT9 166 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 OR52I1Q8NGK6 324 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 PPP1R3EQ9H7J1 279 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 ZNF624Q9P2J8 865 aaPredicted RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 EXO1Q9UQ84 846 aaKnown RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 RPL36Q9Y3U8 105 aaKnown RBP14.17□□□□□ -0.14
CLCN1-201ENST00000343257 WDR90Q96KV7 1748 aa14.17□□□□□ -0.14
CLCN1-201ENST00000343257 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 FFAR1O14842 300 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 KDELR3O43731 214 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 CHP2O43745 196 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 ATF6P18850 670 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 XCR1P46094 333 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 OR1G1P47890 313 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 ABRQ12979 859 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 ZNF177Q13360 481 aaPredicted RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 MFSD13AQ14CX5 517 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 NCF4Q15080 339 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 TRIM71Q2Q1W2 868 aaKnown RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 KIAA1324Q6UXG2 1013 aaKnown RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 OR11H7Q8NGC8 314 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 HUS1BQ8NHY5 278 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 ART5Q96L15 291 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 TMEM43Q9BTV4 400 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 TRAF4Q9BUZ4 470 aaPredicted RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 POLR2J3Q9H1A7 115 aaKnown RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 NUDT15Q9NV35 164 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 RDH8Q9NYR8 311 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 ELF5Q9UKW6 265 aaPredicted RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 PCDHB7Q9Y5E2 793 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 SHISA3A0PJX4 238 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 E7EQ34 232 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 HRO43593 1189 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 ARF5P84085 180 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 DOC2AQ14183 400 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 GPR176Q14439 515 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 TEAD4Q15561 434 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 STK11Q15831 433 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 SPRYD7Q5W111 196 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 MTFR2Q6P444 385 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 OLIG3Q7RTU3 272 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 GPR155Q7Z3F1 870 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 MARCH9Q86YJ5 346 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 PROKR2Q8NFJ6 384 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 OR8J2Q8NGG1 315 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 LRR1Q96L50 414 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 MARVELD1Q9BSK0 173 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 SPNS1Q9H2V7 528 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 PPIEQ9UNP9 301 aaKnown RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 LAMA3Q16787 3333 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 GOLGA4Q13439 2230 aaKnown RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 GLYATL1P3A0A0U1RQE8 302 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 CXCL11O14625 94 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 MPZL2O60487 215 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 SLC43A1O75387 559 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 GJB5O95377 273 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 IFNW1P05000 195 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 BPIP17213 487 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 HMGCLP35914 325 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 VSX2P58304 361 aaPredicted RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 CRYZQ08257 329 aaKnown RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 ALG1LQ6GMV1 187 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 TNFAIP8L2Q6P589 184 aaPredicted RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 LIPIQ6XZB0 460 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 CLDN22Q8N7P3 220 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 GEMIN6Q8WXD5 167 aaKnown RBP14.16□□□□□ -0.14
CLCN1-201ENST00000343257 WFDC6Q9BQY6 131 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 AIFM2Q9BRQ8 373 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 MCOLN1Q9GZU1 580 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 DNAJC11Q9NVH1 559 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 CDH10Q9Y6N8 788 aa14.16□□□□□ -0.14
CLCN1-201ENST00000343257 PATJQ8NI35 1801 aa14.15□□□□□ -0.14
CLCN1-201ENST00000343257 LINC00862A6NCI5 91 aa14.15□□□□□ -0.14
CLCN1-201ENST00000343257 M0QZQ0 153 aa14.15□□□□□ -0.14
CLCN1-201ENST00000343257 SLC30A4O14863 429 aa14.15□□□□□ -0.14
CLCN1-201ENST00000343257 PROM1O43490 865 aa14.15□□□□□ -0.14
CLCN1-201ENST00000343257 HCN1O60741 890 aa14.15□□□□□ -0.14
CLCN1-201ENST00000343257 RAF1P04049 648 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms