RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 SERTAD2Q14140 314 aa15.48■□□□□ 0.07
TRA2B-202ENST00000342294 SF3B4Q15427 424 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRA2B-202ENST00000342294 VASNQ6EMK4 673 aa15.48■□□□□ 0.07
TRA2B-202ENST00000342294 C9orf40Q8IXQ3 194 aa15.48■□□□□ 0.07
TRA2B-202ENST00000342294 SLC15A4Q8N697 577 aa15.48■□□□□ 0.07
TRA2B-202ENST00000342294 OR2L5Q8NG80 312 aa15.48■□□□□ 0.07
TRA2B-202ENST00000342294 SLC22A8Q8TCC7 542 aa15.48■□□□□ 0.07
TRA2B-202ENST00000342294 TRIM5Q9C035 493 aa15.48■□□□□ 0.07
TRA2B-202ENST00000342294 IARS2Q9NSE4 1012 aaKnown RBP15.48■□□□□ 0.07
TRA2B-202ENST00000342294 IKZF3Q9UKT9 509 aa15.48■□□□□ 0.07
TRA2B-202ENST00000342294 NBEAL1Q6ZS30 2694 aa15.48■□□□□ 0.07
TRA2B-202ENST00000342294 A0A088AWK7 358 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 PABPN1LA6NDY0 278 aaKnown RBP15.47■□□□□ 0.07
TRA2B-202ENST00000342294 TRIM3O75382 744 aaPredicted RBP15.47■□□□□ 0.07
TRA2B-202ENST00000342294 CRLF1O75462 422 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 IGKV3-11P04433 115 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 FBXO45P0C2W1 286 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 C1GALT1C1LP0DN25 315 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 ZNF10P21506 573 aaPredicted RBP15.47■□□□□ 0.07
TRA2B-202ENST00000342294 CERS1P27544 350 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 MAGEA3P43357 314 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 PGGT1BP53609 377 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 PLA2G16P53816 162 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 MTTPP55157 894 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 RCN2Q14257 317 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 TRIP13Q15645 432 aaPredicted RBP15.47■□□□□ 0.07
TRA2B-202ENST00000342294 PPP1R3AQ16821 1122 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 ABHD17CQ6PCB6 329 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 SBSNQ6UWP8 590 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 TMIGD1Q6UXZ0 262 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 SLCO4C1Q6ZQN7 724 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 SYDE1Q6ZW31 735 aaPredicted RBP15.47■□□□□ 0.07
TRA2B-202ENST00000342294 VN1R5Q7Z5H4 357 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 MCUQ8NE86 351 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 TTLQ8NG68 377 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 OR10G3Q8NGC4 313 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 ANKRD9Q96BM1 317 aaPredicted RBP15.47■□□□□ 0.07
TRA2B-202ENST00000342294 SENP5Q96HI0 755 aaPredicted RBP15.47■□□□□ 0.07
TRA2B-202ENST00000342294 SIGLEC10Q96LC7 697 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 JSRP1Q96MG2 331 aaPredicted RBP15.47■□□□□ 0.07
TRA2B-202ENST00000342294 RUNDC3BQ96NL0 473 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 SERPINB12Q96P63 405 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 RBM24Q9BX46 236 aaKnown RBP15.47■□□□□ 0.07
TRA2B-202ENST00000342294 CALHM2Q9HA72 323 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 XAB2Q9HCS7 855 aaKnown RBP15.47■□□□□ 0.07
TRA2B-202ENST00000342294 GALNT8Q9NY28 637 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 COPS7AQ9UBW8 275 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 NPFFR2Q9Y5X5 522 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 IKBKGQ9Y6K9 419 aa15.47■□□□□ 0.07
TRA2B-202ENST00000342294 ANKRD33BA6NCL7 494 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 CES2O00748 559 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 LDB3O75112 727 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 CLEC3AO75596 197 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 GDF1P27539 372 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 GSTM2P28161 218 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 GPS1Q13098 491 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 NHSL2Q5HYW2 709 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 DND1Q8IYX4 353 aaKnown RBP15.46■□□□□ 0.07
TRA2B-202ENST00000342294 RNF10Q8N5U6 811 aaKnown RBP15.46■□□□□ 0.07
TRA2B-202ENST00000342294 C9orf106Q8NAJ2 232 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 NTNG2Q96CW9 530 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 WDYHV1Q96HA8 205 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 TRIB1Q96RU8 372 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 REXO4Q9GZR2 422 aaKnown RBP15.46■□□□□ 0.07
TRA2B-202ENST00000342294 UBQLN3Q9H347 655 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 NT5DC2Q9H857 520 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 PRDM7Q9NQW5 492 aa15.46■□□□□ 0.07
TRA2B-202ENST00000342294 SIAH2O43255 324 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 LRATO95237 230 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 AHSGP02765 367 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 HPNP05981 417 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 BMP7P18075 431 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 VPS41P49754 854 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 CDK9P50750 372 aaKnown RBP15.45■□□□□ 0.06
TRA2B-202ENST00000342294 IGLV3-21P80748 117 aaPredicted RBP15.45■□□□□ 0.06
TRA2B-202ENST00000342294 FOXF2Q12947 444 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 TRIM40Q6P9F5 258 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 FAM13CQ8NE31 585 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 PPP1R14CQ8TAE6 165 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 CCT6BQ92526 530 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 PDLIM5Q96HC4 596 aaKnown RBP15.45■□□□□ 0.06
TRA2B-202ENST00000342294 DOHHQ9BU89 302 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 TSPY26PQ9H489 355 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 LYRM4Q9HD34 91 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 HOMER3Q9NSC5 361 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 RYDENQ9NUL5 291 aaKnown RBP15.45■□□□□ 0.06
TRA2B-202ENST00000342294 CAMK2AQ9UQM7 478 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 EIF3LQ9Y262 564 aaKnown RBP15.45■□□□□ 0.06
TRA2B-202ENST00000342294 SLC6A5Q9Y345 797 aa15.45■□□□□ 0.06
TRA2B-202ENST00000342294 GOLGA8MH3BSY2 632 aa15.44■□□□□ 0.06
TRA2B-202ENST00000342294 CASKO14936 926 aa15.44■□□□□ 0.06
TRA2B-202ENST00000342294 H2AFYO75367 372 aaKnown RBP15.44■□□□□ 0.06
TRA2B-202ENST00000342294 ACSL3O95573 720 aa15.44■□□□□ 0.06
TRA2B-202ENST00000342294 CCDC175P0C221 793 aa15.44■□□□□ 0.06
TRA2B-202ENST00000342294 TMIGD3P0DMS9 266 aaPredicted RBP15.44■□□□□ 0.06
TRA2B-202ENST00000342294 GNAZP19086 355 aa15.44■□□□□ 0.06
TRA2B-202ENST00000342294 ID2Q02363 134 aa15.44■□□□□ 0.06
TRA2B-202ENST00000342294 CBLBQ13191 982 aa15.44■□□□□ 0.06
TRA2B-202ENST00000342294 SLBPQ14493 270 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRA2B-202ENST00000342294 NTRK2Q16620 822 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms