RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 EFCAB11Q9BUY7 163 aa14.44□□□□□ -0.1
LINC01116-202ENST00000339037 DERL2Q9GZP9 239 aa14.44□□□□□ -0.1
LINC01116-202ENST00000339037 RHOJQ9H4E5 214 aa14.44□□□□□ -0.1
LINC01116-202ENST00000339037 POPDC3Q9HBV1 291 aa14.44□□□□□ -0.1
LINC01116-202ENST00000339037 PRDM7Q9NQW5 492 aa14.44□□□□□ -0.1
LINC01116-202ENST00000339037 TUBA8Q9NY65 449 aaPredicted RBP14.44□□□□□ -0.1
LINC01116-202ENST00000339037 ZNF490Q9ULM2 529 aaPredicted RBP14.44□□□□□ -0.1
LINC01116-202ENST00000339037 ATG4BQ9Y4P1 393 aa14.44□□□□□ -0.1
LINC01116-202ENST00000339037 SPACA6W5XKT8 324 aa14.44□□□□□ -0.1
LINC01116-202ENST00000339037 EML6Q6ZMW3 1958 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 FAM221AA4D161 298 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 HCN1O60741 890 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 CTAG2O75638 210 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 COX7A2P14406 83 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 GGT5P36269 586 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 DLX5P56178 289 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 ID2Q02363 134 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 CBLBQ13191 982 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 DOC2AQ14183 400 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 PDK4Q16654 411 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 MPEG1Q2M385 716 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 FBXO48Q5FWF7 155 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 PAGE2BQ5JRK9 111 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 C1orf185Q5T7R7 199 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 WDR53Q7Z5U6 358 aaPredicted RBP14.43□□□□□ -0.1
LINC01116-202ENST00000339037 LIX1LQ8IVB5 337 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 ZZZ3Q8IYH5 903 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 SRFBP1Q8NEF9 429 aaKnown RBP14.43□□□□□ -0.1
LINC01116-202ENST00000339037 WDR34Q96EX3 536 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 FOXC2Q99958 501 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 MAPKAP1Q9BPZ7 522 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 TBCDQ9BTW9 1192 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 CNPPD1Q9BV87 410 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 CXXC4Q9H2H0 198 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 DPH5Q9H2P9 285 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 ALG2Q9H553 416 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 EXO5Q9H790 373 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 ALKBH4Q9NXW9 302 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 NSMCE4AQ9NXX6 385 aa14.43□□□□□ -0.1
LINC01116-202ENST00000339037 TRGV5A0A0B4J1U4 118 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 TAPBPO15533 448 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 PRAMEF4O60810 478 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 STK16O75716 305 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 ETHE1O95571 254 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 FBXO45P0C2W1 286 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 GABRA1P14867 456 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 CD22P20273 847 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 SSTR1P30872 391 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 PIGAP37287 484 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 HSPA7P48741 367 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 KCNJ2P63252 427 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 ASPHQ12797 758 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 CDKL4Q5MAI5 379 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 PRAMEF9Q5VWM5 478 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 ARSKQ6UWY0 536 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 ZNF793Q6ZN11 406 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 GPSM1Q86YR5 675 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 SPATA6LQ8N4H0 392 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 ACOT4Q8N9L9 421 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 ZNF721Q8TF20 911 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 ANP32BQ92688 251 aaKnown RBP14.42□□□□□ -0.1
LINC01116-202ENST00000339037 ESAMQ96AP7 390 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 POLDIP3Q9BY77 421 aaKnown RBP14.42□□□□□ -0.1
LINC01116-202ENST00000339037 ZNF703Q9H7S9 590 aaPredicted RBP14.42□□□□□ -0.1
LINC01116-202ENST00000339037 CAB39LQ9H9S4 337 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 SEMA4BQ9NPR2 832 aaPredicted RBP14.42□□□□□ -0.1
LINC01116-202ENST00000339037 CCM2LQ9NUG4 571 aaPredicted RBP14.42□□□□□ -0.1
LINC01116-202ENST00000339037 SPRR3Q9UBC9 169 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 RNF14Q9UBS8 474 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 B4GALT7Q9UBV7 327 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.42□□□□□ -0.1
LINC01116-202ENST00000339037 DNHD1Q96M86 4753 aa14.42□□□□□ -0.1
LINC01116-202ENST00000339037 CXorf49A8MYA2 514 aaPredicted RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 RTCAO00442 366 aaKnown RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 RAD51CO43502 376 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 DYRK3O43781 588 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 WISP3O95389 354 aaPredicted RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 ENDOUP21128 410 aaKnown RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 HIST1H1TP22492 207 aaPredicted RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 ATP5A1P25705 553 aaKnown RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 MSH2P43246 934 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 KIR2DL3P43628 341 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 PPP2R2AP63151 447 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 POU4F1Q01851 419 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 IRF8Q02556 426 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 C2orf54Q08AI8 447 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 ILF2Q12905 390 aaKnown RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 LAPTM5Q13571 262 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 HIST2H2ACQ16777 129 aaPredicted RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 ZNF791Q3KP31 576 aaPredicted RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 TMEM35AQ53FP2 167 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 PIGGQ5H8A4 983 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 RIPPLY2Q5TAB7 128 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 SLC22A10Q63ZE4 541 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 HIST2H2AA3Q6FI13 130 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 SULT1C3Q6IMI6 304 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 UBE3DQ7Z6J8 389 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 TGIF2LYQ8IUE0 185 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 C9orf40Q8IXQ3 194 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 BBOF1Q8ND07 529 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms