RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 RPTNQ6XPR3 784 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 IQCHQ86VS3 1027 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 NUDT13Q86X67 352 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 NXPE1Q8N323 547 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 ZNF680Q8NEM1 530 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 RHEBL1Q8TAI7 183 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 GEMIN6Q8WXD5 167 aaKnown RBP15.41■□□□□ 0.06
NPHP3-201ENST00000337331 PCBD2Q9H0N5 130 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 CFAP20Q9Y6A4 193 aaKnown RBP15.41■□□□□ 0.06
NPHP3-201ENST00000337331 HSPE1-MOB4S4R3N1 261 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 LRRC72A6NJI9 287 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 LDB2O43679 373 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 ECDO95905 644 aaPredicted RBP15.41■□□□□ 0.06
NPHP3-201ENST00000337331 ACP5P13686 325 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 LHCGRP22888 699 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 VSX2P58304 361 aaPredicted RBP15.41■□□□□ 0.06
NPHP3-201ENST00000337331 KLHL22Q53GT1 634 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 KIAA1161Q6NSJ0 714 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 VITQ6UXI7 678 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 FRRS1Q6ZNA5 592 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 ZNF367Q7RTV3 350 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 TAF8Q7Z7C8 310 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 OR4C6Q8NH72 309 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 POFUT2Q9Y2G5 429 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 PCDHA9Q9Y5H5 950 aa15.41■□□□□ 0.06
NPHP3-201ENST00000337331 SOX3P41225 446 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 NCBP2P52298 156 aaKnown RBP eCLIP15.4■□□□□ 0.06
NPHP3-201ENST00000337331 RRAS2P62070 204 aaPredicted RBP15.4■□□□□ 0.06
NPHP3-201ENST00000337331 TLE2Q04725 743 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 USF2Q15853 346 aaPredicted RBP15.4■□□□□ 0.06
NPHP3-201ENST00000337331 SPIN4Q56A73 249 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 TOMM5Q8N4H5 51 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 CPA6Q8N4T0 437 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 OR4K1Q8NGD4 311 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 UFD1Q92890 307 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 NXPE2Q96DL1 559 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 KCNN2Q9H2S1 579 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 POPDC3Q9HBV1 291 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 KLHL21Q9UJP4 597 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 GMEB2Q9UKD1 530 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 TOR1AO14656 332 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 POP7O75817 140 aaKnown RBP15.4■□□□□ 0.06
NPHP3-201ENST00000337331 CPN2P22792 545 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 CDKN2DP55273 166 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 STXBP1P61764 594 aaKnown RBP15.4■□□□□ 0.06
NPHP3-201ENST00000337331 MINDY4Q4G0A6 757 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 LRRN1Q6UXK5 716 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 RANBP3LQ86VV4 465 aaPredicted RBP15.4■□□□□ 0.06
NPHP3-201ENST00000337331 SPNS2Q8IVW8 549 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 NLGN4XQ8N0W4 816 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 PELI3Q8N2H9 469 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 FAM86B1Q8N7N1 296 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 FANK1Q8TC84 345 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 KLHL6Q8WZ60 621 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 ALOXE3Q9BYJ1 711 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 ACOXLQ9NUZ1 547 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 FAM120CQ9NX05 1096 aaKnown RBP15.4■□□□□ 0.06
NPHP3-201ENST00000337331 B4GALT6Q9UBX8 382 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 GJB5O95377 273 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 BCHEP06276 602 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 H1F0P07305 194 aaKnown RBP15.4■□□□□ 0.06
NPHP3-201ENST00000337331 SLC10A3P09131 477 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 MAGEA11P43364 429 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 BDKRB1P46663 353 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 SLC35A2P78381 396 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 SPHARQ15513 63 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 CEACAM20Q6UY09 585 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 VTCN1Q7Z7D3 282 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 TMEM40Q8WWA1 233 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 TCEAL3Q969E4 200 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 TBX5Q99593 518 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 NUDT15Q9NV35 164 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 OSGIN1Q9UJX0 560 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 A0A1W2PPL8 197 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 RAB3AP20336 220 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 PCBP2Q15366 365 aaKnown RBP eCLIP15.4■□□□□ 0.06
NPHP3-201ENST00000337331 GPR135Q8IZ08 494 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 BEST4Q8NFU0 473 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 CAPNS2Q96L46 248 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 DPEP2Q9H4A9 486 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 GSTO2Q9H4Y5 243 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 EXTL2Q9UBQ6 330 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 GLS2Q9UI32 602 aa15.4■□□□□ 0.06
NPHP3-201ENST00000337331 APOC1P02654 83 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 TRAPPC2P0DI81 140 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 TRAPPC2BP0DI82 140 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 ACRP10323 421 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 NRIP1P48552 1158 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 ARHGDIBP52566 201 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 TAS2R50P59544 299 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 RAB8AP61006 207 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 CXCR4P61073 352 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 CBLBQ13191 982 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 GTDC1Q4AE62 458 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 PRSS42Q7Z5A4 293 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 CLEC14AQ86T13 490 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 MARCH9Q86YJ5 346 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 NPAS3Q8IXF0 933 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 COX18Q8N8Q8 333 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 KCT2Q8NC54 265 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms