RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 KBTBD8Q8NFY9 601 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 OR51A7Q8NH64 312 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 ZNF607Q96SK3 696 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 KXD1Q9BQD3 176 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 TMEM175Q9BSA9 504 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 ASPNQ9BXN1 380 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 TEX12Q9BXU0 123 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 ACOT13Q9NPJ3 140 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 UCKL1Q9NWZ5 548 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 KLHL28Q9NXS3 571 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 CASP8AP2Q9UKL3 1982 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 TSC2P49815 1807 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 FAM155AB1AL88 458 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 MID1O15344 667 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 IDH3BO43837 385 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 NPPAP01160 153 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 GASTP01350 101 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 ACADMP11310 421 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 PSKH1P11801 424 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 NT5EP21589 574 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 AK4P27144 223 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 SIM1P81133 766 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 LSM11P83369 360 aaKnown RBP eCLIP7.85□□□□□ -1.15
HPS4-201ENST00000336873 PPP2R2BQ00005 443 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 C1orf61Q13536 156 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 TEAD4Q15561 434 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 PRSS36Q5K4E3 855 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 ATAT1Q5SQI0 421 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 CCNJQ5T5M9 372 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 ZNF691Q5VV52 312 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 ENPP7Q6UWV6 458 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 PTRH1Q86Y79 214 aaKnown RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 C7orf61Q8IZ16 206 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 TEX47Q8TBZ9 253 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 C16orf78Q8WTQ4 265 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 LCN9Q8WX39 176 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 CXorf40BQ96DE9 158 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 LRR1Q96L50 414 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 OR4K3Q96R72 315 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 TM9SF2Q99805 663 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 ALOXE3Q9BYJ1 711 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 MMP28Q9H239 520 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 GORASP2Q9H8Y8 452 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 NMNAT1Q9HAN9 279 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 RC3H2Q9HBD1 1191 aaKnown RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 FAIMQ9NVQ4 179 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 DNMT3BQ9UBC3 853 aaKnown RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 HCN4Q9Y3Q4 1203 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 TRBV4-1A0A0J9YWV2 114 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 C2orf92A0A1B0GVN3 265 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 FABP12A6NFH5 140 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 H0YJX3 145 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 AP3D1O14617 1153 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 SMAD9O15198 467 aaKnown RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 ENTPD6O75354 484 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 ADH1CP00326 375 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 H1F0P07305 194 aaKnown RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 ZDHHC11BP0C7U3 371 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 CEBPBP17676 345 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 EIF4EBP2Q13542 120 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 COQ5Q5HYK3 327 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 SLC30A6Q6NXT4 461 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 CNKSR3Q6P9H4 555 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.85□□□□□ -1.15
HPS4-201ENST00000336873 NLGN4YQ8NFZ3 816 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 OR10H4Q8NGA5 316 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 S100ZQ8WXG8 99 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 BADQ92934 168 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 TIFAQ96CG3 184 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 PPP1R16AQ96I34 528 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 SLC35G5Q96KT7 338 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 SLC7A5P2Q9GIP4 190 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 STARD5Q9NSY2 213 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 TEX10Q9NXF1 929 aaPredicted RBP7.85□□□□□ -1.15
HPS4-201ENST00000336873 BACE2Q9Y5Z0 518 aa7.85□□□□□ -1.15
HPS4-201ENST00000336873 IQCMA0A1B0GVH7 501 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 C1QTNF3-AMACRE9PGA6 284 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 NTN1O95631 604 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 IFNA16P05015 189 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 ANXA8P13928 327 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 GDI1P31150 447 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 PNLIPRP1P54315 467 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 TUBA1BP68363 451 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 HNRNPA0Q13151 305 aaKnown RBP7.84□□□□□ -1.15
HPS4-201ENST00000336873 DPY19L1Q2PZI1 675 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 FAM46CQ5VWP2 391 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 SHQ1Q6PI26 577 aaKnown RBP7.84□□□□□ -1.15
HPS4-201ENST00000336873 TUBA1AQ71U36 451 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 TRIM69Q86WT6 500 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 ENTHD1Q8IYW4 607 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 GATSQ8NAP1 163 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 CYB561A3Q8NBI2 242 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 OR51G2Q8NGK0 314 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 SMAP2Q8WU79 429 aaPredicted RBP7.84□□□□□ -1.15
HPS4-201ENST00000336873 NXPE3Q969Y0 559 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 TTLL2Q9BWV7 592 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 FBXL12Q9NXK8 326 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 WBP11Q9Y2W2 641 aaKnown RBP7.84□□□□□ -1.15
HPS4-201ENST00000336873 YARS2Q9Y2Z4 477 aaKnown RBP7.84□□□□□ -1.15
HPS4-201ENST00000336873 ABHD14A-ACY1A0A1B0GW23 586 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms