RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PIKFYVEQ9Y2I7 2098 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 GBF1Q92538 1859 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 SLC35F4A4IF30 521 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 C2orf78A6NCI8 922 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 PLOD3O60568 738 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 C1QBP02746 253 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 KLKB1P03952 638 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 PRPH2P23942 346 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 HBA1P69905 142 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 ZNF91Q05481 1191 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.1□□□□□ -0.31
SYNE3-201ENST00000334258 ATAT1Q5SQI0 421 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 LYPLAL1Q5VWZ2 237 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 ADNP2Q6IQ32 1131 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 TSPAN33Q86UF1 283 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 PDZD3Q86UT5 571 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 TIGD4Q8IY51 512 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 CELF5Q8N6W0 485 aaKnown RBP13.1□□□□□ -0.31
SYNE3-201ENST00000334258 SYT14Q8NB59 555 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 DIABLOQ9NR28 239 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 LHX3Q9UBR4 397 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 CASKO14936 926 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 TLX2O43763 284 aaPredicted RBP13.1□□□□□ -0.31
SYNE3-201ENST00000334258 PCSK2P16519 638 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 CFL1P23528 166 aaKnown RBP13.1□□□□□ -0.31
SYNE3-201ENST00000334258 ASMTP46597 345 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 SNTA1Q13424 505 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 CDH18Q13634 790 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 RTP2Q5QGT7 225 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 C6orf132Q5T0Z8 1188 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 SLC37A3Q8NCC5 494 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 AP3S1Q92572 193 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 HHIPQ96QV1 700 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 SLC12A9Q9BXP2 914 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 NDUFB11Q9NX14 153 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 FTSJ1Q9UET6 329 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 BTNL2Q9UIR0 455 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
SYNE3-201ENST00000334258 MYO16Q9Y6X6 1858 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 LOC102723532A0A0G2JNH3 316 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 C1orf226A1L170 272 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 BTN3A3O00478 584 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 ORC5O43913 435 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 TPST2O60704 377 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 CD160O95971 181 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 IL1AP01583 271 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 ATF6P18850 670 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 MYL12AP19105 171 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 HNMTP50135 292 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 PTPN5P54829 565 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 TARDBPQ13148 414 aaKnown RBP eCLIP13.09□□□□□ -0.31
SYNE3-201ENST00000334258 TRIM40Q6P9F5 258 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 CREB3L2Q70SY1 520 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 VRK3Q8IV63 474 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 LRRC20Q8TCA0 184 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 CHTF18Q8WVB6 975 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 BTN2A2Q8WVV5 523 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 TM9SF2Q99805 663 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 GALNT9Q9HCQ5 603 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 SLC23A1Q9UHI7 598 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 TRBV4-1A0A0J9YWV2 114 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 WASHC1A8K0Z3 465 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 LRRTM2O43300 516 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 MTX2O75431 263 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 OR56A5P0C7T3 313 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 ACRP10323 421 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 XKP51811 444 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 DOC2AQ14183 400 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 CNIH2Q6PI25 160 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 TMC8Q8IU68 726 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 OR8H3Q8N146 312 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 PROKR2Q8NFJ6 384 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 REPS1Q96D71 796 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 METTL2AQ96IZ6 378 aaKnown RBP13.09□□□□□ -0.31
SYNE3-201ENST00000334258 QRFPRQ96P65 431 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 ACAT2Q9BWD1 397 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 CHST8Q9H2A9 424 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 RBFOX1Q9NWB1 397 aaKnown RBP13.09□□□□□ -0.31
SYNE3-201ENST00000334258 PLEKHB1Q9UF11 243 aaPredicted RBP13.09□□□□□ -0.31
SYNE3-201ENST00000334258 A0A0C4DFX4 3053 aa13.09□□□□□ -0.31
SYNE3-201ENST00000334258 A8MUA0 341 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 E7EQ34 232 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 LYRM1O43325 122 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 C8GP07360 202 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 CBSLP0DN79 551 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 IDSP22304 550 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 CBSP35520 551 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 XCR1P46094 333 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 TLE2Q04725 743 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 NAE1Q13564 534 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 HEPACAMQ14CZ8 416 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 ZNF284Q2VY69 593 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 GPR33Q49SQ1 333 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 HSDL2Q6YN16 418 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 GPR155Q7Z3F1 870 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 IQCF1Q8N6M8 205 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 NANOGP1Q8N7R0 232 aa13.08□□□□□ -0.31
SYNE3-201ENST00000334258 OR4M1Q8NGD0 313 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms