RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 HDAC8Q9BY41 377 aa17.98■□□□□ 0.47
RFTN1-201ENST00000334133 AICDAQ9GZX7 198 aa17.98■□□□□ 0.47
RFTN1-201ENST00000334133 SERHL2Q9H4I8 314 aa17.98■□□□□ 0.47
RFTN1-201ENST00000334133 CCNB1IP1Q9NPC3 277 aa17.98■□□□□ 0.47
RFTN1-201ENST00000334133 WBP1LQ9NX94 342 aa17.98■□□□□ 0.47
RFTN1-201ENST00000334133 POFUT2Q9Y2G5 429 aa17.98■□□□□ 0.47
RFTN1-201ENST00000334133 PDZK1P1A8MUH7 402 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 CLDN25C9JDP6 229 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 ANHXE9PGG2 379 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 PTHP01270 115 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 GADD45AP24522 165 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 GRK5P34947 590 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 LSM11P83369 360 aaKnown RBP eCLIP17.97■□□□□ 0.47
RFTN1-201ENST00000334133 ST3GAL4Q11206 333 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 HEPACAMQ14CZ8 416 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 DGLUCYQ7Z3D6 616 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 MEX3DQ86XN8 651 aaKnown RBP17.97■□□□□ 0.47
RFTN1-201ENST00000334133 STX19Q8N4C7 294 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 MTERF3Q96E29 417 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 COL21A1Q96P44 957 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 SIRT3Q9NTG7 399 aaPredicted RBP17.97■□□□□ 0.47
RFTN1-201ENST00000334133 SPATA7Q9P0W8 599 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 ZFR2Q9UPR6 939 aaKnown RBP17.97■□□□□ 0.47
RFTN1-201ENST00000334133 HCN4Q9Y3Q4 1203 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 GPSM3Q9Y4H4 160 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 C5orf67F2Z3F1 127 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 SLC22A1O15245 554 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 ITGA2P17301 1181 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 GPC1P35052 558 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 PBX2P40425 430 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 SSR2P43308 183 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 CSNK1G2P78368 415 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 SEC23BQ15437 767 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 TIGD6Q17RP2 521 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 C2orf27AQ580R0 203 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 KIAA1211LQ6NV74 962 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 CCDC80Q76M96 950 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 COMTD1Q86VU5 262 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 ZHX1-C8orf76Q96EF9 292 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 THSD1Q9NS62 852 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 CLCA1A8K7I4 914 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 C4orf51C9J302 202 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 HMGN4O00479 90 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 SLC28A2O43868 658 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 DNAJB5O75953 348 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 IFNA14P01570 189 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 CNR2P34972 360 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 CCT3P49368 545 aaKnown RBP17.97■□□□□ 0.47
RFTN1-201ENST00000334133 MAPK11Q15759 364 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 C10orf62Q5T681 223 aaPredicted RBP17.97■□□□□ 0.47
RFTN1-201ENST00000334133 ZNF793Q6ZN11 406 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 IKBIPQ70UQ0 350 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 WDR53Q7Z5U6 358 aaPredicted RBP17.97■□□□□ 0.47
RFTN1-201ENST00000334133 BCDIN3DQ7Z5W3 292 aaKnown RBP17.97■□□□□ 0.47
RFTN1-201ENST00000334133 CLIP4Q8N3C7 705 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 DYNC2LI1Q8TCX1 351 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 PDXPQ96GD0 296 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 COX4I2Q96KJ9 171 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 SIGLEC11Q96RL6 698 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 DPH7Q9BTV6 452 aa17.97■□□□□ 0.47
RFTN1-201ENST00000334133 DNAAF2Q9NVR5 837 aaKnown RBP17.97■□□□□ 0.47
RFTN1-201ENST00000334133 SPEGQ15772 3267 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 PRAMEF27A3QJZ7 478 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 TMEM247A6NEH6 219 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 RFXAPO00287 272 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 BMP4P12644 408 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 IFITM3Q01628 133 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 INAQ16352 499 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 OR8K5Q8NH50 307 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 IPCEF1Q8WWN9 437 aaPredicted RBP17.96■□□□□ 0.47
RFTN1-201ENST00000334133 ITPAQ9BY32 194 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 RHBGQ9H310 441 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 POLE4Q9NR33 117 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 ERGIC3Q9Y282 383 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 NUP210Q8TEM1 1887 aaPredicted RBP17.96■□□□□ 0.47
RFTN1-201ENST00000334133 MUC22E2RYF6 1773 aaPredicted RBP17.96■□□□□ 0.47
RFTN1-201ENST00000334133 ALPK3Q96L96 1907 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 TRBV23OR9-2A0A075B6M9 112 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 SLC31A1O15431 190 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 DPM1O60762 260 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 CHMP24386 653 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 RPA4Q13156 261 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 RGS21Q2M5E4 152 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 NDUFAF5Q5TEU4 345 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 SAXO2Q658L1 398 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 NUDT13Q86X67 352 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 ZNF513Q8N8E2 541 aaPredicted RBP17.96■□□□□ 0.47
RFTN1-201ENST00000334133 B3GNT7Q8NFL0 401 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 OR14C36Q8NHC7 312 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 OR5P2Q8WZ92 322 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 NEURL3Q96EH8 262 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 SYNPO2LQ9H987 977 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 DPP7Q9UHL4 492 aa17.96■□□□□ 0.47
RFTN1-201ENST00000334133 SCN2AQ99250 2005 aa17.96■□□□□ 0.46
RFTN1-201ENST00000334133 E9PQ18 207 aa17.95■□□□□ 0.46
RFTN1-201ENST00000334133 M0R3H8 397 aa17.95■□□□□ 0.46
RFTN1-201ENST00000334133 KMOO15229 486 aa17.95■□□□□ 0.46
RFTN1-201ENST00000334133 NARSO43776 548 aaKnown RBP17.95■□□□□ 0.46
RFTN1-201ENST00000334133 AIREO43918 545 aa17.95■□□□□ 0.46
RFTN1-201ENST00000334133 DBTP11182 482 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms