RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TMEM104Q8NE00 496 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 OSMRQ99650 979 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 CRB3Q9BUF7 120 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 RYDENQ9NUL5 291 aaKnown RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 LRRC72A6NJI9 287 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 LSSP48449 732 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ERVK-21P61565 698 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ATG9BQ674R7 924 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 P4HA3Q7Z4N8 544 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 C12orf40Q86WS4 652 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF454Q8N9F8 522 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 PAPD5Q8NDF8 572 aaKnown RBP9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ELP5Q8TE02 316 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 WNT8BQ93098 351 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 LRCH3Q96II8 777 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 SEMA3CQ99985 751 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 AMBNQ9NP70 447 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ABI3Q9P2A4 366 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 PTCH2Q9Y6C5 1203 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 SCAMP3O14828 347 aaKnown RBP9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 EEDO75530 441 aaKnown RBP9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 RAB3DO95716 219 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 RETP07949 1114 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ANXA4P09525 319 aaPredicted RBP9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ZP3P21754 424 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 C10orf62Q5T681 223 aaPredicted RBP9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 MON1BQ7L1V2 547 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF584Q8IVC4 421 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 PLD5Q8N7P1 536 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 RAB3CQ96E17 227 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 MGLLQ99685 303 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 DZANK1Q9NVP4 752 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 H3BUI4 141 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 P2RX6O15547 441 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 PCCBP05166 539 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 DCNP07585 359 aaKnown RBP9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 CSF1P09603 554 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 HOXC6P09630 235 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ABHD18Q0P651 414 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ECH1Q13011 328 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 NLRP8Q86W28 1048 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 PARP16Q8N5Y8 322 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 PXT1Q8NFP0 134 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 ZDHHC1Q8WTX9 485 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 LRFN5Q96NI6 719 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 BCAS3Q9H6U6 928 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 NLKQ9UBE8 527 aa9.96□□□□□ -0.81
SPTBN1-201ENST00000333896 TOR1AO14656 332 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 TMEM205Q6UW68 189 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 MFSD6LQ8IWD5 586 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 NDNFQ8TB73 568 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 ZNF251Q9BRH9 671 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 PDGFDQ9GZP0 370 aaPredicted RBP9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 KNDC1Q76NI1 1749 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 DISP1Q96F81 1524 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 H1F0P07305 194 aaKnown RBP9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 HEXBP07686 556 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 KLF1Q13351 362 aaPredicted RBP9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 SPHARQ15513 63 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 KCTD12Q96CX2 325 aaKnown RBP9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 PAPOLGQ9BWT3 736 aaKnown RBP9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 QTRT2Q9H974 415 aaKnown RBP9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 PCDHB9Q9Y5E1 797 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 ZNF670-ZNF695F2Z2N8 137 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 CNOT4O95628 575 aaKnown RBP9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 C1QBP02746 253 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 ADH1AP07327 375 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 OR8U9P0C7N5 309 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 NR2C1P13056 603 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 HSD17B1P14061 328 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 CD9P21926 228 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 HNRNPKP61978 463 aaKnown RBP eCLIP9.96□□□□□ -0.823e-8■□□□□ 9.9
SPTBN1-201ENST00000333896 FAM182BQ5T319 152 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 CERS6Q6ZMG9 384 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 COX15Q7KZN9 410 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 BOLLQ8N9W6 283 aaKnown RBP9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 TEX264Q9Y6I9 313 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 ECM29Q5VYK3 1845 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 ADAMTS13Q76LX8 1427 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 SOCS2O14508 198 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 CIDEAO60543 219 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 CREG1O75629 220 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 STK16O75716 305 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 DNM1P34Q6PK57 102 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 AQP11Q8NBQ7 271 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 GPR151Q8TDV0 419 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC5A11Q8WWX8 675 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 FCRL3Q96P31 734 aaPredicted RBP9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 ZDHHC5Q9C0B5 715 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 IL25Q9H293 177 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 B3GALT1Q9Y5Z6 326 aa9.96□□□□□ -0.82
SPTBN1-201ENST00000333896 MT-CO2P00403 227 aa9.95□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC5A2P31639 672 aa9.95□□□□□ -0.82
SPTBN1-201ENST00000333896 PER3P56645 1201 aa9.95□□□□□ -0.82
SPTBN1-201ENST00000333896 MTPNP58546 118 aa9.95□□□□□ -0.82
SPTBN1-201ENST00000333896 RPS3AP61247 264 aaKnown RBP9.95□□□□□ -0.82
SPTBN1-201ENST00000333896 IGSF11Q5DX21 431 aa9.95□□□□□ -0.82
SPTBN1-201ENST00000333896 UQCC3Q6UW78 93 aa9.95□□□□□ -0.82
SPTBN1-201ENST00000333896 FAM124AQ86V42 546 aa9.95□□□□□ -0.82
SPTBN1-201ENST00000333896 CHST13Q8NET6 341 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms