RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 NID2Q14112 1375 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 ROBO1Q9Y6N7 1651 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 ANKRD66B4E2M5 251 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 OR1E2P47887 323 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 SELENOVP59797 346 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 C6orf141Q5SZD1 244 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC35F1Q5T1Q4 408 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 DNTTIP1Q9H147 329 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 ASF1BQ9NVP2 202 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 HHLA1C9JL84 531 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 WNT7AO00755 349 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 TRAPPC6AO75865 159 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 NPAS4Q8IUM7 802 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 SMPDL3AQ92484 453 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 C19orf25Q9UFG5 118 aaPredicted RBP16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 DCCP43146 1447 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 TFP02787 698 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 AKR1C4P17516 323 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 RHBDL3P58872 404 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 ACTR1AP61163 376 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 RAB11BQ15907 218 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 LYSMD3Q7Z3D4 306 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 TXN2Q99757 166 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 CCNOP22674 350 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 LMO2P25791 158 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 HK3P52790 923 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 AMZ1Q400G9 498 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 SC5DO75845 299 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 TNFP01375 233 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 RAB3BP20337 219 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 STT3AP46977 705 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 FBXO22Q8NEZ5 403 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 OR13J1Q8NGT2 312 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 CNOT9Q92600 299 aaKnown RBP16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 PADI3Q9ULW8 664 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 IRS2Q9Y4H2 1338 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 GMDSO60547 372 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 AOC2O75106 756 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 CNTN5O94779 1100 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 OXSR1O95747 527 aaPredicted RBP16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 GNSP15586 552 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 FAM118AQ9NWS6 357 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 WDR45Q9Y484 360 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 RNF215Q9Y6U7 377 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 RPS13P62277 151 aaKnown RBP16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 FUT2Q10981 343 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 ARHGAP11AQ6P4F7 1023 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 CMASQ8NFW8 434 aaPredicted RBP16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 MAN2C1Q9NTJ4 1040 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 EBF1Q9UH73 591 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 PCTPQ9UKL6 214 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF175Q9Y473 711 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 PHYHO14832 338 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 C7orf57Q8NEG2 295 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 OR6N2Q8NGY6 317 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 RNF11Q9Y3C5 154 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 MYBPHLA2RUH7 354 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC25A11Q02978 314 aaKnown RBP16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 TMEM234Q8WY98 164 aa16.22■□□□□ 0.19
SMCHD1-201ENST00000320876 A0A0G2JN53 185 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 ADRB3P13945 408 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 NPRL3Q12980 569 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 RIN1Q13671 783 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 LAPTM4AQ15012 233 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF678Q5SXM1 525 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 LIPJQ5W064 366 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC22A8Q8TCC7 542 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 KCNA7Q96RP8 456 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 FZD3Q9NPG1 666 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 RHCGQ9UBD6 479 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 HCRTR2O43614 444 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 ADGRF1Q5T601 910 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 P2RY13Q9BPV8 354 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 ZFR2Q9UPR6 939 aaKnown RBP16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 A0A0A6YYH2 397 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 A6NJ64 397 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 TTLL8A6PVC2 850 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 KHNYNO15037 678 aaKnown RBP16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 UCHL1P09936 223 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 ENDOUP21128 410 aaKnown RBP16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 KCNAB2Q13303 367 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 METTL11BQ5VVY1 283 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 OR5M3Q8NGP4 307 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 OR6N1Q8NGY5 312 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 OR8K5Q8NH50 307 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 REEP4Q9H6H4 257 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 MST1RQ04912 1400 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC22A31A6NKX4 558 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 AHSGP02765 367 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 WASP42768 502 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 POLR2HP52434 150 aaKnown RBP16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 MLLT10P55197 1068 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 BATFQ16520 125 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 DCUN1D3Q8IWE4 304 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 TXNDC5Q8NBS9 432 aaKnown RBP16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 TTTY10Q9BZA0 68 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 KCNH6Q9H252 994 aa16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 CARS2Q9HA77 564 aaKnown RBP16.21■□□□□ 0.19
SMCHD1-201ENST00000320876 COL5A2P05997 1499 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms