RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 DPH7Q9BTV6 452 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 MENTQ9BUN1 341 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 RBM4Q9BWF3 364 aaKnown RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ASPSCR1Q9BZE9 553 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 FOXQ1Q9C009 403 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 NDEL1Q9GZM8 345 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SLC6A16Q9GZN6 736 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 DSN1Q9H410 356 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 RMND5AQ9H871 391 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 TEX10Q9NXF1 929 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 FZD4Q9ULV1 537 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 RUVBL1Q9Y265 456 aaKnown RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 NCKAP1Q9Y2A7 1128 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ORC6Q9Y5N6 252 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ZDBF2Q9HCK1 2354 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ABCA7Q8IZY2 2146 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 CABIN1Q9Y6J0 2220 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 EFCAB9A8MZ26 197 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ANHXE9PGG2 379 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SCAMP2O15127 329 aaKnown RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 EIF2S1P05198 315 aaKnown RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 PVRP15151 417 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 GADD45AP24522 165 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 TIA1P31483 386 aaKnown RBP eCLIP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 IDH2P48735 452 aaKnown RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 PRKAG1P54619 331 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 COPZ1P61923 177 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 PPP1CAP62136 330 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SRSF5Q13243 272 aaKnown RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 UBXN2BQ14CS0 331 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 COQ5Q5HYK3 327 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ATG9BQ674R7 924 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 DESI1Q6ICB0 168 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 CCDC103Q8IW40 242 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 UBE2J2Q8N2K1 259 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 PIK3C3Q8NEB9 887 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 OR13H1Q8NG92 308 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 OR6Q1Q8NGQ2 317 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 OR2A1Q8NGT9 310 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 C11orf24Q96F05 449 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 TOE1Q96GM8 510 aaKnown RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 GABRG3Q99928 467 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 YIPF4Q9BSR8 244 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 KCNH6Q9H252 994 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 DCSTAMPQ9H295 470 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 QPCTLQ9NXS2 382 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 DNMT3AQ9Y6K1 912 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SCN3AQ9NY46 2000 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 EVPLLA8MZ36 301 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 SNPHO15079 494 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 CASC3O15234 703 aaKnown RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 NDUFS4O43181 175 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 TMPRSS11DO60235 418 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 SH3BP5O60239 455 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 DNAJB6O75190 326 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 ERAL1O75616 437 aaKnown RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 GABARAPO95166 117 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 EPN2O95208 641 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 KCNK5O95279 499 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 MAPK1P28482 360 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 TGM4P49221 684 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 MAPK12P53778 367 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 CSTF3Q12996 717 aaKnown RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 RPE65Q16518 533 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 DGUOKQ16854 277 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 SLC5A12Q1EHB4 618 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 DUOXA1Q1HG43 343 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 METTL2BQ6P1Q9 378 aaKnown RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 WDR53Q7Z5U6 358 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 ADGRF3Q8IZF5 1079 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 TTC29Q8NA56 475 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 KCT2Q8NC54 265 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 OR8K5Q8NH50 307 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 DYNC2LI1Q8TCX1 351 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 C16orf78Q8WTQ4 265 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 LCN9Q8WX39 176 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 DNASE1L2Q92874 299 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 RAB8BQ92930 207 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 PPCDCQ96CD2 204 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 KCNS3Q9BQ31 491 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 CHCHD6Q9BRQ6 235 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 BEX2Q9BXY8 128 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 SLIRPQ9GZT3 109 aaKnown RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 OR51E2Q9H255 320 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 PRDM6Q9NQX0 595 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 STARD5Q9NSY2 213 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 GPATCH2Q9NW75 528 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 SPATA7Q9P0W8 599 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 ICKQ9UPZ9 632 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 SAMHD1Q9Y3Z3 626 aaKnown RBP7.23□□□□□ -1.25
TRIM55-202ENST00000315962 NOX1Q9Y5S8 564 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 TICRRQ7Z2Z1 1910 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 CKAP5Q14008 2032 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 GSAPA4D1B5 854 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 C4orf51C9J302 202 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 HAT1O14929 419 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 PCDHGA12O60330 932 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 C7P10643 843 aa7.23□□□□□ -1.25
TRIM55-202ENST00000315962 TYRP1P17643 537 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms