RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 STK35Q8TDR2 534 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 ZNF382Q96SR6 550 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 FAM83CQ9BQN1 747 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 SLC22A14Q9Y267 594 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 A0A096LPI6 279 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 UNC119BA6NIH7 251 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 MMP20O60882 483 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 SIRPB2Q5JXA9 342 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 ZNF283Q8N7M2 679 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 TSGA13Q96PP4 275 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 CD244Q9BZW8 370 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 PCYT1BQ9Y5K3 369 aaPredicted RBP14.89□□□□□ -0.03
HCFC1-201ENST00000310441 ANKRD66B4E2M5 251 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 EPOP01588 193 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 CHRM1P11229 460 aaPredicted RBP14.89□□□□□ -0.03
HCFC1-201ENST00000310441 LEPRP48357 1165 aaKnown RBP14.89□□□□□ -0.03
HCFC1-201ENST00000310441 PITPNBP48739 271 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 CLCNKAP51800 687 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 OR5H2Q8NGV7 314 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 ZFR2Q9UPR6 939 aaKnown RBP14.89□□□□□ -0.03
HCFC1-201ENST00000310441 SHMT2P34897 504 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 IL17AQ16552 155 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 OR5AK3PQ8NH89 298 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 PWWP2AQ96N64 755 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 KIF25Q9UIL4 384 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 FAM214AQ32MH5 1076 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 MAP1SQ66K74 1059 aaPredicted RBP14.89□□□□□ -0.03
HCFC1-201ENST00000310441 PAQR3Q6TCH7 311 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 MS4A15Q8N5U1 240 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 BEST4Q8NFU0 473 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 OR9A4Q8NGU2 314 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 SPTSSAQ969W0 71 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 MSI2Q96DH6 328 aaKnown RBP14.89□□□□□ -0.03
HCFC1-201ENST00000310441 TWNKQ96RR1 684 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 GPR22Q99680 433 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 ZNF559Q9BR84 538 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 SLA2Q9H6Q3 261 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 APBB3O95704 486 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 UCHL1P09936 223 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 IRF9Q00978 393 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 ENPP7Q6UWV6 458 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 ZNF808Q8N4W9 903 aaPredicted RBP14.89□□□□□ -0.03
HCFC1-201ENST00000310441 C1orf127Q8N9H9 656 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.89□□□□□ -0.032e-6■■■□□ 18.9
HCFC1-201ENST00000310441 AMBNQ9NP70 447 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 PRDM4Q9UKN5 801 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 C8AP07357 584 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 ZNF43P17038 809 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 RPS3AP61247 264 aaKnown RBP14.89□□□□□ -0.03
HCFC1-201ENST00000310441 PMS2P3Q13401 168 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 KRBOX4Q5JUW0 171 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 PLEKHO2Q8TD55 490 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 NAP1L6A6NFF2 107 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 HMX3A6NHT5 357 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 CHRM5P08912 532 aaPredicted RBP14.88□□□□□ -0.03
HCFC1-201ENST00000310441 ADRB3P13945 408 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 PROZP22891 400 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 PTGIRP43119 386 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 UGCGQ16739 394 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 WDR45BQ5MNZ6 344 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 MLIPQ5VWP3 458 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 TAC4Q86UU9 113 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 DAZLQ92904 295 aaKnown RBP14.88□□□□□ -0.03
HCFC1-201ENST00000310441 ZNF334Q9HCZ1 680 aaPredicted RBP14.88□□□□□ -0.03
HCFC1-201ENST00000310441 TP53TG5Q9Y2B4 290 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 TRBV2A0A0J9YWF9 115 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 A8MT66 165 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 C9JVG2 144 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 GMDSO60547 372 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 HEXBP07686 556 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 FAM46BQ96A09 425 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 SMOC2Q9H3U7 446 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 PPP1R14DQ9NXH3 145 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 DNAJC27Q9NZQ0 273 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 TRPM6Q9BX84 2022 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 XRN1Q8IZH2 1706 aaKnown RBP14.88□□□□□ -0.03
HCFC1-201ENST00000310441 MRPS14O60783 128 aaKnown RBP14.88□□□□□ -0.03
HCFC1-201ENST00000310441 HLA-DQB2P05538 268 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 ITGB5P18084 799 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 MAT2AP31153 395 aaKnown RBP14.88□□□□□ -0.03
HCFC1-201ENST00000310441 SMYD5Q6GMV2 418 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 RCBTB1Q8NDN9 531 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 GLYATL2Q8WU03 294 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 C7orf34Q96L11 122 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 FAM159BA6NKW6 160 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 ALDH3B1P43353 468 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 NCCRP1Q6ZVX7 275 aaPredicted RBP14.88□□□□□ -0.03
HCFC1-201ENST00000310441 OR5L2Q8NGL0 311 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 LRRN4Q8WUT4 740 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 HMGB4Q8WW32 186 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 MANBAO00462 879 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 ETV6P41212 452 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 ARRB1P49407 418 aaPredicted RBP14.88□□□□□ -0.03
HCFC1-201ENST00000310441 NAALAD2Q9Y3Q0 740 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 RAB19A4D1S5 217 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 MEGF11A6BM72 1044 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 SLC16A5O15375 505 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 CSKP41240 450 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 BRCC3P46736 316 aa14.88□□□□□ -0.03
HCFC1-201ENST00000310441 ARSFP54793 590 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms