RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 PNO1Q9NRX1 252 aaKnown RBP8.52□□□□□ -1.05
PDE4D-201ENST00000309641 SIRT5Q9NXA8 310 aa8.52□□□□□ -1.05
PDE4D-201ENST00000309641 TLN1Q9Y490 2541 aaKnown RBP8.52□□□□□ -1.05
PDE4D-201ENST00000309641 PRRC2CQ9Y520 2896 aaKnown RBP8.52□□□□□ -1.05
PDE4D-201ENST00000309641 CNTRLQ7Z7A1 2325 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 GOLGA8QA0A0J9YX86 632 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 GOLGA8OA6NCC3 632 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 TCP11X1B4DZS4 312 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 GOLGA8NF8WBI6 632 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 K7EM74 188 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 HDAC3O15379 428 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 LRATO95237 230 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 FAM87AP0C7U9 286 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 BCKDHAP12694 445 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 BUD31P41223 144 aaPredicted RBP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 ALDH9A1P49189 494 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 CCL11P51671 97 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 GYS2P54840 703 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 OR4D2P58180 307 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 SLC9B1Q4ZJI4 515 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 PAPD4Q6PIY7 484 aaKnown RBP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 PCSK4Q6UW60 755 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 FNDC5Q8NAU1 212 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 PIWIL2Q8TC59 973 aaKnown RBP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 TTC9Q92623 222 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 IMMP1LQ96LU5 166 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 C7orf26Q96N11 449 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 ZNF700Q9H0M5 742 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 MEAF6Q9HAF1 191 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 MS4A12Q9NXJ0 267 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 RALYQ9UKM9 306 aaKnown RBP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 MRPS33Q9Y291 106 aaKnown RBP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 MMACHCQ9Y4U1 282 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 PCDHA9Q9Y5H5 950 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 SPACA6W5XKT8 324 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 NSG1A0A0A6YYJ2 146 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 A0A1W2PQ72 361 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 HRKO00198 91 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 PEX12O00623 359 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 AKAP10O43572 662 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 MYO1DO94832 1006 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 SNUPNO95149 360 aaKnown RBP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 IGHEP01854 428 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 PRR35P0CG20 571 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 TLX1P31314 330 aaPredicted RBP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 ST13P50502 369 aaKnown RBP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 DIO3P55073 304 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 IGLV3-21P80748 117 aaPredicted RBP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 ZNF763Q0D2J5 394 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 C2orf80Q0P641 193 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 STX4Q12846 297 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 SF3A3Q12874 501 aaKnown RBP eCLIP8.51□□□□□ -1.055e-6■■■■□ 19.6
PDE4D-201ENST00000309641 PTGR1Q14914 329 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 ATP6AP1LQ52LC2 224 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 IL23RQ5VWK5 629 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 FAM71E1Q6IPT2 247 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 ANKRD26P1Q6NSI1 321 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 SLC48A1Q6P1K1 146 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 LARP4Q71RC2 724 aaKnown RBP eCLIP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 CRLF3Q8IUI8 442 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 KIF2BQ8N4N8 673 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 ZNF321PQ8N8H1 164 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 ADAMTS18Q8TE60 1221 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 APOBEC4Q8WW27 367 aaKnown RBP8.51□□□□□ -1.05
PDE4D-201ENST00000309641 NACC2Q96BF6 587 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 PPP3R2Q96LZ3 170 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 OR52B2Q96RD2 323 aa8.51□□□□□ -1.05
PDE4D-201ENST00000309641 ERAL1O75616 437 aaKnown RBP8.5□□□□□ -1.05
PDE4D-201ENST00000309641 GPR75O95800 540 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 IFNA16P05015 189 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 ALDOCP09972 364 aaKnown RBP8.5□□□□□ -1.05
PDE4D-201ENST00000309641 SOX18P35713 384 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 FEN1P39748 380 aaKnown RBP8.5□□□□□ -1.05
PDE4D-201ENST00000309641 ACTN3Q08043 901 aaPredicted RBP8.5□□□□□ -1.05
PDE4D-201ENST00000309641 TMEM198Q66K66 360 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 BORAQ6PGQ7 559 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 RGS9BPQ6ZS82 235 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 NDUFAF7Q7L592 441 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 LIX1Q8N485 282 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 KRTCAP2Q8N6L1 136 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 EXD3Q8N9H8 876 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 TMEM102Q8N9M5 508 aaPredicted RBP8.5□□□□□ -1.05
PDE4D-201ENST00000309641 SIMC1Q8NDZ2 872 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 NFAM1Q8NET5 270 aaPredicted RBP8.5□□□□□ -1.05
PDE4D-201ENST00000309641 FDCSPQ8NFU4 85 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 PTPMT1Q8WUK0 201 aaPredicted RBP8.5□□□□□ -1.05
PDE4D-201ENST00000309641 TANKQ92844 425 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 CNRIP1Q96F85 164 aaPredicted RBP8.5□□□□□ -1.05
PDE4D-201ENST00000309641 CATSPER2Q96P56 530 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 EBF4Q9BQW3 602 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 WDR41Q9HAD4 459 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 MYNNQ9NPC7 610 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 RIC8BQ9NVN3 520 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 VTI1BQ9UEU0 232 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 USH1CQ9Y6N9 552 aa8.5□□□□□ -1.05
PDE4D-201ENST00000309641 TNRC6AQ8NDV7 1962 aaKnown RBP8.5□□□□□ -1.05
PDE4D-201ENST00000309641 C1orf226A1L170 272 aa8.49□□□□□ -1.05
PDE4D-201ENST00000309641 EDF1O60869 148 aaKnown RBP8.49□□□□□ -1.05
PDE4D-201ENST00000309641 HPP00738 406 aa8.49□□□□□ -1.05
PDE4D-201ENST00000309641 PDGFAP04085 211 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms