RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TAZQ16635 292 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PIWIL3Q7Z3Z3 882 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 LRRC25Q8N386 305 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 CBR4Q8N4T8 237 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CMKLR1Q99788 373 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 UPK3BL1B0FP48 263 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 UPK3BL2E5RIL1 263 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 MAP3K8P41279 467 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 C21orf58P58505 322 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 UBE2MP61081 183 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 BLOC1S1P78537 153 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 NFATC2Q13469 925 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZNF266Q14584 549 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 FAAH2Q6GMR7 532 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CMTR2Q8IYT2 770 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZNF454Q8N9F8 522 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PROKR2Q8NFJ6 384 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 OR56A3Q8NH54 315 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZFP90Q8TF47 636 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 SUV39H2Q9H5I1 410 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 LAMP5Q9UJQ1 280 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 GLTPD2A6NH11 291 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CST5P28325 142 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 GABRA5P31644 462 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 EIF1P41567 113 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 SF1Q15637 639 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 GRIK5Q16478 980 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 SLC35D3Q5M8T2 416 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 P4HA3Q7Z4N8 544 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 C1orf216Q8TAB5 229 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 NDNFQ8TB73 568 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 DNASE1L2Q92874 299 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 OSMRQ99650 979 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 WDR26Q9H7D7 661 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 VSTM2BA6NLU5 285 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 RFPL1O75677 317 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 RLN1P04808 185 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 HBG1P69891 147 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 HBG2P69892 147 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CDK10Q15131 360 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 OR52E8Q6IFG1 317 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 NCCRP1Q6ZVX7 275 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 LARP4Q71RC2 724 aaKnown RBP eCLIP3.86□□□□□ -1.79
USH2A-201ENST00000307340 TRIM46Q7Z4K8 759 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PXKQ7Z7A4 578 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 FBXO15Q8NCQ5 510 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 OR5D14Q8NGL3 314 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 OR13J1Q8NGT2 312 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 NAT6Q93015 286 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 SLC25A31Q9H0C2 315 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 MTG2Q9H4K7 406 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PCP4L1A6NKN8 68 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CLEC3AO75596 197 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CREG1O75629 220 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 IFNA2P01563 188 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 UBBP0CG47 229 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 G6PDP11413 515 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 BCL2A1Q16548 175 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 FUT10Q6P4F1 479 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 UQCC3Q6UW78 93 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ANKRD13BQ86YJ7 626 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PGBD3Q8N328 593 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 OR4K2Q8NGD2 314 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 BPIFB1Q8TDL5 484 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 GPER1Q99527 375 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PIGMQ9H3S5 423 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 DAPL1A0PJW8 107 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 BNIP3LO60238 219 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 RBBP9O75884 186 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 WASP42768 502 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 FGFBP1Q14512 234 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 GRK1Q15835 563 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ACSBG2Q5FVE4 666 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 GNPDA2Q8TDQ7 276 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 MYLKQ15746 1914 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 LOC100506127A0A0U1RQW1 187 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PIRO00625 290 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 KCNQ2O43526 872 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 OR5F1O95221 314 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 PGLSO95336 258 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CD36P16671 472 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CTU2Q2VPK5 515 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 FNDC3BQ53EP0 1204 aaKnown RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 GARNL3Q5VVW2 1013 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 WSCD1Q658N2 575 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZNF584Q8IVC4 421 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 LGALS12Q96DT0 336 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.86□□□□□ -1.79
USH2A-201ENST00000307340 IL1RL2Q9HB29 575 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 NFS1Q9Y697 457 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 LOC102725191A0A1B0GVB3 256 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 KDM4BO94953 1096 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 MT-ATP6P00846 226 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 POU2F1P14859 743 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TNNI3P19429 210 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 RGS19P49795 217 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 TAS2R20P59543 309 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZIK1Q3SY52 487 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 CDNFQ49AH0 187 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 CYP27C1Q4G0S4 372 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms