RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 SLC35F5Q8WV83 523 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 ZNF681Q96N22 645 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 SLC2A9Q9NRM0 540 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 HAO2Q9NYQ3 351 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 AMHP03971 560 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 ZNF182P17025 639 aaPredicted RBP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 OR52E4Q8NGH9 312 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 OR1S1Q8NH92 325 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 PKP2Q99959 881 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 OR51J1Q9H342 316 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 NTN4Q9HB63 628 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 RNF19AQ9NV58 838 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 KLRC4O43908 158 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 MAPK8P45983 427 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 CLRN1P58418 232 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 TGFB2P61812 414 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 RPL7AP62424 266 aaKnown RBP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 TEX261Q6UWH6 196 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 LGI4Q8N135 537 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 U3KQ87 197 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 SDC3O75056 442 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 ACTL6BO94805 426 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 ZIC2O95409 532 aaPredicted RBP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 C21orf62-AS1Q17RA5 79 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 SLC29A4Q7RTT9 530 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 LGMNQ99538 433 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 SLIT3O75094 1523 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 A0A1W2PPW3 197 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 USF1P22415 310 aaPredicted RBP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 ZNF41P51814 821 aaPredicted RBP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 CLEC6AQ6EIG7 209 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 C22orf42Q6IC83 251 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 TOP6BLQ8N6T0 577 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 TRIB2Q92519 343 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 HAS1Q92839 578 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 MRPL38Q96DV4 380 aaKnown RBP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 RSPRY1Q96DX4 576 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 UHRF2Q96PU4 802 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 VWA7Q9Y334 891 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 ADAM12O43184 909 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 HOXA2O43364 376 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 SCO1O75880 301 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 BDNFP23560 247 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 TRNP1Q6NT89 227 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 MED27Q6P2C8 311 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 CORO6Q6QEF8 472 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 C14orf80Q86SX3 495 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 RNF180Q86T96 592 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 DEFB106AQ8N104 65 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 DNERQ8NFT8 737 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 MEPEQ9NQ76 525 aaPredicted RBP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 TLX2O43763 284 aaPredicted RBP10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 FMO6PO60774 539 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 PTPRAP18433 802 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 BEX3Q00994 111 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 ZNF791Q3KP31 576 aaPredicted RBP10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 STEAP4Q687X5 459 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 BBS12Q6ZW61 710 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 GAREM2Q75VX8 874 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 RAVER1Q8IY67 606 aaKnown RBP10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 SLC5A11Q8WWX8 675 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 AKT1S1Q96B36 256 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 TO15178 435 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 KCNK2O95069 426 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 SELENOVP59797 346 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 HNRNPKP61978 463 aaKnown RBP eCLIP10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 ZNF169Q14929 603 aaPredicted RBP10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 EXOSC6Q5RKV6 272 aaKnown RBP10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 DNAJC22Q8N4W6 341 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 RAB39BQ96DA2 213 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 TSSK6Q9BXA6 273 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 THUMPD1Q9NXG2 353 aaKnown RBP10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 OR12D3Q9UGF7 316 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 ATRNO75882 1429 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 ARHGAP23Q9P227 1491 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 TSPAN11A1L157 253 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 B3GALT2O43825 422 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 YIF1BQ5BJH7 314 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 RSC1A1Q92681 617 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 KIF13BQ9NQT8 1826 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 MPPED1O15442 326 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 RPLP2P05387 115 aaKnown RBP10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 CPN1P15169 458 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 EPHA1P21709 976 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 CAV2P51636 162 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 GPR135Q8IZ08 494 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 LILRB4Q8NHJ6 448 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 DNAJB8Q8NHS0 232 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 EBF4Q9BQW3 602 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 MRPL22Q9NWU5 206 aaKnown RBP10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 KLHL13Q9P2N7 655 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 ASB3Q9Y575 518 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 CLIC3O95833 236 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 FGF1P05230 155 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 ASGR1P07306 291 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 HLA-DOBP13765 273 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 RFC2P35250 354 aa10.76□□□□□ -0.69
HDGFL3-201ENST00000299633 NR4A2P43354 598 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms