RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CLK4Q9HAZ1 481 aaKnown RBP20.22■□□□□ 0.83
SOX17-201ENST00000297316 ETAA1Q9NY74 926 aa20.22■□□□□ 0.83
SOX17-201ENST00000297316 ADAM29Q9UKF5 820 aa20.22■□□□□ 0.83
SOX17-201ENST00000297316 FBXW2Q9UKT8 454 aa20.22■□□□□ 0.83
SOX17-201ENST00000297316 DMDP11532 3685 aa20.22■□□□□ 0.83
SOX17-201ENST00000297316 CABIN1Q9Y6J0 2220 aa20.22■□□□□ 0.83
SOX17-201ENST00000297316 C2orf74A8MZ97 194 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 H0YAE9 185 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 VILLO15195 856 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 PDPK1O15530 556 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 TNFSF14O43557 240 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 TBX19O60806 448 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 TNFRSF1BP20333 461 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 ATP5A1P25705 553 aaKnown RBP20.21■□□□□ 0.83
SOX17-201ENST00000297316 RPS15AP62244 130 aaKnown RBP20.21■□□□□ 0.83
SOX17-201ENST00000297316 SCARB2Q14108 478 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 DEFB133Q30KQ1 61 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 TSEN54Q7Z6J9 526 aaKnown RBP20.21■□□□□ 0.83
SOX17-201ENST00000297316 C7orf34Q96L11 122 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 KCNC2Q96PR1 638 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 SIRT3Q9NTG7 399 aaPredicted RBP20.21■□□□□ 0.83
SOX17-201ENST00000297316 UCKL1Q9NWZ5 548 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 THEGQ9P2T0 379 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 ATG4BQ9Y4P1 393 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 TMEM131Q92545 1883 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 SPTBP11277 2137 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 HS6ST1O60243 411 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 PTGER1P34995 402 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 CDK9P50750 372 aaKnown RBP20.21■□□□□ 0.83
SOX17-201ENST00000297316 NXPH1P58417 271 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 HSPB3Q12988 150 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 ELOCQ15369 112 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 TRIM40Q6P9F5 258 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 ASPGQ86U10 573 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 IQCHQ86VS3 1027 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 ZCCHC10Q8TBK6 192 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 TAMM41Q96BW9 452 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 RBM4BQ9BQ04 359 aaKnown RBP20.21■□□□□ 0.83
SOX17-201ENST00000297316 RBM4Q9BWF3 364 aaKnown RBP20.21■□□□□ 0.83
SOX17-201ENST00000297316 PILRAQ9UKJ1 303 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 DOLKQ9UPQ8 538 aa20.21■□□□□ 0.83
SOX17-201ENST00000297316 ANKRD33BA6NCL7 494 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 HCRTR1O43613 425 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 ZNF888P0CJ79 500 aaPredicted RBP20.2■□□□□ 0.82
SOX17-201ENST00000297316 UQCRC2P22695 453 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 MANFP55145 182 aaKnown RBP20.2■□□□□ 0.82
SOX17-201ENST00000297316 BIRC2Q13490 618 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 MYBPC3Q14896 1274 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 SHQ1Q6PI26 577 aaKnown RBP20.2■□□□□ 0.82
SOX17-201ENST00000297316 SHISA5Q8N114 240 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 ARL14Q8N4G2 192 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 OR5P2Q8WZ92 322 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 WBP11Q9Y2W2 641 aaKnown RBP20.2■□□□□ 0.82
SOX17-201ENST00000297316 ASB4Q9Y574 426 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 A0A1W2PR48 441 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 MYO1GB0I1T2 1018 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 MITFO75030 526 aaPredicted RBP20.2■□□□□ 0.82
SOX17-201ENST00000297316 C9P02748 559 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 FRKP42685 505 aaPredicted RBP20.2■□□□□ 0.82
SOX17-201ENST00000297316 SH3BGRP55822 239 aaPredicted RBP20.2■□□□□ 0.82
SOX17-201ENST00000297316 BTN3A2P78410 334 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 FADDQ13158 208 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 SLC9A5Q14940 896 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 TEAD4Q15561 434 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 C18orf63Q68DL7 685 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 TMEM38AQ9H6F2 299 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 FAM118AQ9NWS6 357 aa20.2■□□□□ 0.82
SOX17-201ENST00000297316 WDFY4Q6ZS81 3184 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 A0A1W2PS29 197 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 OR5K3A6NET4 321 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 PGRMC2O15173 223 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 SUV39H1O43463 412 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 HOXB6P17509 224 aaKnown RBP20.19■□□□□ 0.82
SOX17-201ENST00000297316 GSTM2P28161 218 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 POLR2IP36954 125 aaKnown RBP20.19■□□□□ 0.82
SOX17-201ENST00000297316 PRIM2P49643 509 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 SRSF5Q13243 272 aaKnown RBP20.19■□□□□ 0.82
SOX17-201ENST00000297316 KCNAB2Q13303 367 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 KCTD21Q4G0X4 260 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 ZC3H7AQ8IWR0 971 aaKnown RBP20.19■□□□□ 0.82
SOX17-201ENST00000297316 MPP4Q96JB8 637 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 PCDHGA2Q9Y5H1 932 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 PRAMEF25A6NGN4 478 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 DNAJB6O75190 326 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 EIF2S1P05198 315 aaKnown RBP20.19■□□□□ 0.82
SOX17-201ENST00000297316 YAP1P46937 504 aaKnown RBP20.19■□□□□ 0.82
SOX17-201ENST00000297316 FNTBP49356 437 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 CDK6Q00534 326 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 ZNF750Q32MQ0 723 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 CYP27C1Q4G0S4 372 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 SAXO2Q658L1 398 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 MRM1Q6IN84 353 aaKnown RBP20.19■□□□□ 0.82
SOX17-201ENST00000297316 SLC36A4Q6YBV0 504 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 CYP4Z1Q86W10 505 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 HIPK1Q86Z02 1210 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 HORMAD2Q8N7B1 307 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 TBC1D20Q96BZ9 403 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 TM4SF19Q96DZ7 209 aa20.19■□□□□ 0.82
SOX17-201ENST00000297316 NECAB3Q96P71 396 aaPredicted RBP20.19■□□□□ 0.82
SOX17-201ENST00000297316 DOHHQ9BU89 302 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms