RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 IFT172Q9UG01 1749 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 UNC119BA6NIH7 251 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 BEST1O76090 585 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 C1GALT1C1LP0DN25 315 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 ALPPL2P10696 532 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 GPX3P22352 226 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 CCKBRP32239 447 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 CLCNKAP51800 687 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 ZNF280AP59817 542 aaPredicted RBP10.58□□□□□ -0.72
PBRM1-201ENST00000296302 FGFBP1Q14512 234 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 PGM2L1Q6PCE3 622 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 VTCN1Q7Z7D3 282 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 KLBQ86Z14 1044 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 DCP2Q8IU60 420 aaKnown RBP10.58□□□□□ -0.72
PBRM1-201ENST00000296302 KCT2Q8NC54 265 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 C7orf57Q8NEG2 295 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 CCDC54Q8NEL0 328 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 OR8S1Q8NH09 359 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 GAL3ST3Q96A11 431 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 GON7Q9BXV9 100 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 GSTO2Q9H4Y5 243 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 YIPF1Q9Y548 306 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 PIK3C2AO00443 1686 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 A0A1B0GVT2 93 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 CD8B2A6NJW9 211 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 RFPL3O75679 317 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 CD8BP10966 210 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 NR2C1P13056 603 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 GCAP28676 217 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 RBMXP38159 391 aaKnown RBP10.58□□□□□ -0.72
PBRM1-201ENST00000296302 MTNR1AP48039 350 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 PGGT1BP53609 377 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 ACTA2P62736 377 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 ACTG2P63267 376 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 PITX1P78337 314 aaPredicted RBP10.58□□□□□ -0.72
PBRM1-201ENST00000296302 CES4AQ5XG92 561 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 BEST3Q8N1M1 668 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 OR8K5Q8NH50 307 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 SUN3Q8TAQ9 357 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 SH3RF2Q8TEC5 729 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.58□□□□□ -0.72
PBRM1-201ENST00000296302 SYT4Q9H2B2 425 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 TAS2R8Q9NYW2 309 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 GSKIPQ9P0R6 139 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 GRHPRQ9UBQ7 328 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.58□□□□□ -0.72
PBRM1-201ENST00000296302 SMAD9O15198 467 aaKnown RBP10.58□□□□□ -0.72
PBRM1-201ENST00000296302 OSMP13725 252 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 GCGRP47871 477 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 C11orf91Q3C1V1 193 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 DGLUCYQ7Z3D6 616 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 CTU1Q7Z7A3 348 aaKnown RBP10.58□□□□□ -0.72
PBRM1-201ENST00000296302 ZNF584Q8IVC4 421 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 LILRB4Q8NHJ6 448 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 ADAMTS19Q8TE59 1207 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 CPNE2Q96FN4 548 aaPredicted RBP10.58□□□□□ -0.72
PBRM1-201ENST00000296302 P2RY13Q9BPV8 354 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 NANSQ9NR45 359 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 FBXL3Q9UKT7 428 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 ACSL6Q9UKU0 697 aa10.58□□□□□ -0.72
PBRM1-201ENST00000296302 PLATP00750 562 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 MRPL3P09001 348 aaKnown RBP10.57□□□□□ -0.72
PBRM1-201ENST00000296302 OR12D1P0DN82 309 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 ITGAMP11215 1152 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 EDNRBP24530 442 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 PYCR1P32322 319 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 CNR2P34972 360 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 ERVK-21P61565 698 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 RING1Q06587 406 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 IRF5Q13568 498 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 UAP1L1Q3KQV9 507 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 CCDC58Q4VC31 144 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 PAGE3Q5JUK9 113 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 C22orf39Q6P5X5 142 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 RHOXF1Q8NHV9 184 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 NETO1Q8TDF5 533 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 FUBP1Q96AE4 644 aaKnown RBP10.57□□□□□ -0.72
PBRM1-201ENST00000296302 HDHD5Q9BXW7 423 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 SAV1Q9H4B6 383 aaPredicted RBP10.57□□□□□ -0.72
PBRM1-201ENST00000296302 SARDHQ9UL12 918 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 ENPP4Q9Y6X5 453 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 SCDO00767 359 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 SCAMP2O15127 329 aaKnown RBP10.57□□□□□ -0.72
PBRM1-201ENST00000296302 SOX30O94993 753 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 CSTBP04080 98 aaKnown RBP10.57□□□□□ -0.72
PBRM1-201ENST00000296302 C8AP07357 584 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 AGXTP21549 392 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 CRHBPP24387 322 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 ACRV1P26436 265 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 OXTRP30559 389 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 GDI2P50395 445 aaKnown RBP10.57□□□□□ -0.72
PBRM1-201ENST00000296302 FXYD6P3P58550 94 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 EIF2S3LQ2VIR3 472 aaKnown RBP10.57□□□□□ -0.72
PBRM1-201ENST00000296302 LRRC37A5PQ49AS3 106 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 BCL2L15Q5TBC7 163 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 OR2T35Q8NGX2 323 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 COQ10AQ96MF6 247 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 DGAT2Q96PD7 388 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 RGCCQ9H4X1 137 aa10.57□□□□□ -0.72
PBRM1-201ENST00000296302 SERINC1Q9NRX5 453 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms