RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 IL23AQ9NPF7 189 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 FAM120CQ9NX05 1096 aaKnown RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 ALKBH4Q9NXW9 302 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 RNF6Q9Y252 685 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 BACE2Q9Y5Z0 518 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 GREB1Q4ZG55 1949 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 RIIAD1A6NNX1 92 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PLD2O14939 933 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PGRMC2O15173 223 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ACOX3O15254 700 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CAPN5O15484 640 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 KLHL18O94889 574 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ATE1O95260 518 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PENKP01210 267 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 FPR1P21462 350 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 C21orf33P30042 268 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 ACSL1P33121 698 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ACVR1BP36896 505 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ATP4BP51164 291 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CLDN8P56748 225 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 HNRNPA0Q13151 305 aaKnown RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 NDUFAF6Q330K2 333 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 LRIT3Q3SXY7 679 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ANKDD1AQ495B1 522 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 TPRG1LQ5T0D9 272 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 REEP3Q6NUK4 255 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CENPSQ8N2Z9 138 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 NUP43Q8NFH3 380 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 OR9A2Q8NGT5 310 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 OVCA2Q8WZ82 227 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 MMABQ96EY8 250 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 MSLNLQ96KJ4 702 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 C5orf34Q96MH7 638 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ZNF347Q96SE7 839 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 HDHD5Q9BXW7 423 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ITPAQ9BY32 194 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PCDHGA8Q9Y5G5 932 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PRAMEF33A0A0G2JMD5 474 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CPNE3O75131 537 aaKnown RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 CFIP05156 583 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 MSL3P1P0C860 447 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 SMIM18P0DKX4 95 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 AP2S1P53680 142 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 HBA1P69905 142 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.57□□□□□ -1.68
UBR1-201ENST00000290650 NPRL3Q12980 569 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ZNF267Q14586 743 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 GINS1Q14691 196 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 NDUFAF5Q5TEU4 345 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PRPF38BQ5VTL8 546 aaKnown RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 MLIPQ5VWP3 458 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ZNF776Q68DI1 518 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 LCN8Q6JVE9 175 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 NANOGNBQ7Z5D8 188 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 IGFN1Q86VF2 1251 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 MARCH9Q86YJ5 346 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 OR8J3Q8NGG0 315 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 OR2A12Q8NGT7 310 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 TMEM19Q96HH6 336 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 WACQ9BTA9 647 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 DOHHQ9BU89 302 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 OR8D2Q9GZM6 311 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 BTBD1Q9H0C5 482 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ARMC1Q9NVT9 282 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 TAS2R9Q9NYW1 312 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 MAPRE3Q9UPY8 281 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CEPT1Q9Y6K0 416 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PRKNO60260 465 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 RAD1O60671 282 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 HMGA1P17096 107 aaKnown RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 IL12BP29460 328 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CNR2P34972 360 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CSNK1DP48730 415 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CAV3P56539 151 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ELAVL3Q14576 367 aaKnown RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 MTFR2Q6P444 385 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PRR22Q8IZ63 422 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ANKFN1Q8N957 763 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PHOSPHO1Q8TCT1 267 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 TMED5Q9Y3A6 229 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 TRAV6A0A075B6T7 132 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 OPN1LWP04000 364 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PIGAP37287 484 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 MC3RP41968 323 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CD47Q08722 323 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 RANBP3LQ86VV4 465 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 TMEM151AQ8N4L1 468 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 LEMD2Q8NC56 503 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 OR52E4Q8NGH9 312 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ZNF480Q8WV37 535 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 NXPE3Q969Y0 559 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PEX11GQ96HA9 241 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 GNG8Q9UK08 70 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 POFUT2Q9Y2G5 429 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 MED31Q9Y3C7 131 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PARP14Q460N5 1801 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 WASHC1A8K0Z3 465 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 GYPBP06028 91 aa4.56□□□□□ -1.68
UBR1-201ENST00000290650 ZNF888P0CJ79 500 aaPredicted RBP4.56□□□□□ -1.68
UBR1-201ENST00000290650 MTHFD2P13995 350 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms