RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HSH2DQ96JZ2 352 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 FAR2Q96K12 515 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 MAGEB10Q96LZ2 347 aaPredicted RBP8.55□□□□□ -1.04
HMGN1-201ENST00000288344 AGAP4Q96P64 663 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 ZIM3Q96PE6 472 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 SERPINI1Q99574 410 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 ROGDIQ9GZN7 287 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 PRTFDC1Q9NRG1 225 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 B3GNT3Q9Y2A9 372 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 NTNG1Q9Y2I2 539 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 ANGPTL3Q9Y5C1 460 aa8.55□□□□□ -1.04
HMGN1-201ENST00000288344 A0A1W2PS29 197 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 BLACEA4D250 179 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 SAGE2PA6NJ88 616 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 SMIM23A6NLE4 172 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 FIGNL2A6NMB9 653 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TTLL8A6PVC2 850 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 COPEO14579 308 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 PGRMC2O15173 223 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 CTIFO43310 598 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 FGF17O60258 216 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 PRKNO60260 465 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 KLHL41O60662 606 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 DPM1O60762 260 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 CLPSP04118 112 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 FAM58BPP0C7Q3 252 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 HSD3B1P14060 373 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TAC1P20366 129 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 S1PR1P21453 382 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 VAMP1P23763 118 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ITGA3P26006 1051 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 HSD3B2P26439 372 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 MSX1P28360 303 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 GRNP28799 593 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ALDH3A1P30838 453 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TNFSF10P50591 281 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 OR4D2P58180 307 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 NAA20P61599 178 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TLE1Q04724 770 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TGM3Q08188 693 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 EXT1Q16394 746 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF468Q5VIY5 522 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF324BQ6AW86 544 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 RPUSD3Q6P087 351 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 Q6ZSR9 355 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 GPRIN3Q6ZVF9 776 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 GPR180Q86V85 440 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 LGI4Q8N135 537 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 KIF2BQ8N4N8 673 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 CDYL2Q8N8U2 506 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TCP10LQ8TDR4 215 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 CCT6BQ92526 530 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TANKQ92844 425 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 NTNG2Q96CW9 530 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 PGM2Q96G03 612 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 APOPT1Q96IL0 206 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 VPS50Q96JG6 964 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 KCNA7Q96RP8 456 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 LPAR4Q99677 370 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 MRPL1Q9BYD6 325 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ALOXE3Q9BYJ1 711 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 SLC29A3Q9BZD2 475 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ACPTQ9BZG2 426 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TUBB1Q9H4B7 451 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 SSU72Q9NP77 194 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 MS4A12Q9NXJ0 267 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 C19orf25Q9UFG5 118 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 EXO1Q9UQ84 846 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TIMM22Q9Y584 194 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 FLNBO75369 2602 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ESPL1Q14674 2120 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 USP9YO00507 2555 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 UTP20O75691 2785 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 CROCCQ5TZA2 2017 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 SVILO95425 2214 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 A0A088AWK7 358 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 CCDC151A5D8V7 595 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 CLDN4O14493 209 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF354AO60765 605 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TRIM13O60858 407 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 LDB3O75112 727 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 PRKRAO75569 313 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 WISP2O76076 250 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 GPR75O95800 540 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 WDPCPO95876 746 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 GBAP04062 536 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ENO1P06733 434 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 MYL2P10916 166 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF10P21506 573 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 PRPH2P23942 346 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 GALNSP34059 522 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TRHRP34981 398 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 MLLT10P55197 1068 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 MLF1P58340 268 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TNFRSF17Q02223 184 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 MGAT2Q10469 447 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 BIKQ13323 160 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 DDX39BQ13838 428 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ELAVL1Q15717 326 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 CEBPEQ15744 281 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms