RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 MPPE1Q53F39 396 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 IDNKQ5T6J7 187 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 LIPJQ5W064 366 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 AMIGO1Q86WK6 493 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 MARCH9Q86YJ5 346 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 OR8H3Q8N146 312 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 WDR48Q8TAF3 677 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 C2orf15Q8WU43 125 aaKnown RBP12.79□□□□□ -0.36
SCAF4-201ENST00000286835 NEIL2Q969S2 332 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 TMEM98Q9Y2Y6 226 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 YARS2Q9Y2Z4 477 aaKnown RBP12.79□□□□□ -0.36
SCAF4-201ENST00000286835 GRIP1Q9Y3R0 1128 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 ENPP4Q9Y6X5 453 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 MYLKQ15746 1914 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 GLOD5A6NK44 160 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 MEN1O00255 615 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 PLD2O14939 933 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 PRMT3O60678 531 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 IGLV3-27P01718 113 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 ELFN1P0C7U0 828 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 IFITM2Q01629 132 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 PTSQ03393 145 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 KLHL12Q53G59 568 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 RAET1GQ6H3X3 334 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 PSRC1Q6PGN9 363 aaPredicted RBP12.79□□□□□ -0.36
SCAF4-201ENST00000286835 ZNF438Q7Z4V0 828 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 GLCCI1Q86VQ1 547 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 IQCHQ86VS3 1027 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 CHST14Q8NCH0 376 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 CYB5D2Q8WUJ1 264 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 ZNF607Q96SK3 696 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 GABARAPL1Q9H0R8 117 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 AHSPQ9NZD4 102 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 TMEM202A6NGA9 273 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 YY2O15391 372 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 OR2B3O76000 313 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 FAHD1Q6P587 224 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 UBQLNLQ8IYU4 475 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 SLC37A3Q8NCC5 494 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 SORCS1Q8WY21 1168 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 COL26A1Q96A83 441 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 ZNF717Q9BY31 904 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 STUB1Q9UNE7 303 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 NYNRINQ9P2P1 1898 aaKnown RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 TRAV6A0A075B6T7 132 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 TRBV5-3A0A0A0MS03 114 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 MRPS14O60783 128 aaKnown RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 CYP2A6P11509 494 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 PAICSP22234 425 aaKnown RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 APEX1P27695 318 aaKnown RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 CSNK1DP48730 415 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 EIF4HQ15056 248 aaKnown RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 DUSP7Q16829 419 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 REEP3Q6NUK4 255 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 GRASPQ7Z6J2 395 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 CHCHD4Q8N4Q1 142 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 PCNPQ8WW12 178 aaKnown RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 FCRL4Q96PJ5 515 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 C11orf54Q9H0W9 315 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 KCNK12Q9HB15 430 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 MBD1Q9UIS9 605 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 CLEC4EQ9ULY5 219 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 PDCD11Q14690 1871 aaKnown RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 MAP2K3P46734 347 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 DGKGP49619 791 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 MAN2A2P49641 1150 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 TAS2R41P59536 307 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 DSC1Q08554 894 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 GPM6BQ13491 265 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 ZNF630Q2M218 657 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 CCDC58Q4VC31 144 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 SMARCD3Q6STE5 483 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 LRRC17Q8N6Y2 441 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 C12orf76Q8N812 135 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 UFD1Q92890 307 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 RNF121Q9H920 327 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 STOX2Q9P2F5 926 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 DEC1Q9P2X7 70 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 SPEF1Q9Y4P9 236 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 ZNF646O15015 1829 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-201ENST00000286835 PLXNA1Q9UIW2 1896 aa12.78□□□□□ -0.36
SCAF4-201ENST00000286835 F11P03951 625 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 CHRNB1P11230 501 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 CDK10Q15131 360 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 B3GLCTQ6Y288 498 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 MMP21Q8N119 569 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 YIPF7Q8N8F6 280 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 SYT14Q8NB59 555 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 OR6F1Q8NGZ6 308 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 C7orf34Q96L11 122 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 OR2AG1Q9H205 316 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 FBXL12Q9NXK8 326 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 KLK4Q9Y5K2 254 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 CENPBD1B2RD01 187 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 H3BNC9 293 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 M0R3H8 397 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 NCR1O76036 304 aa12.77□□□□□ -0.36
SCAF4-201ENST00000286835 POP4O95707 220 aaKnown RBP12.77□□□□□ -0.36
SCAF4-201ENST00000286835 IDSP22304 550 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms