RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 DBPQ10586 325 aaPredicted RBP5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 GRSF1Q12849 480 aaKnown RBP eCLIP5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 VEZF1Q14119 521 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 ZNF691Q5VV52 312 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 MTSS1LQ765P7 747 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 AMIGO1Q86WK6 493 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 ZNF614Q8N883 585 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 ACOT4Q8N9L9 421 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 AQP11Q8NBQ7 271 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 FBXO15Q8NCQ5 510 aaPredicted RBP5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 SLC9A6Q92581 669 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 HSPBAP1Q96EW2 488 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 ZBED6CLQ96FA7 236 aaPredicted RBP5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 C7orf34Q96L11 122 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 MRGPRX1Q96LB2 322 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 RIPOR3Q96MK2 946 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 OR2M4Q96R27 311 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 C1QTNF7Q9BXJ2 289 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 C1QTNF2Q9BXJ5 285 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 LHX9Q9NQ69 397 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 SEMA3GQ9NS98 782 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 TAS2R16Q9NYV7 291 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 DUSP12Q9UNI6 340 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 LYVE1Q9Y5Y7 322 aa5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 ASCC3Q8N3C0 2202 aaKnown RBP5.74□□□□□ -1.49
TNFSF4-201ENST00000281834 LOC100506127A0A0U1RQW1 187 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 PNMA8CA0A1B0GUJ8 204 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 LRIT2A6NDA9 550 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 STK25O00506 426 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 ZSCAN9O15535 394 aaPredicted RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 B4GALT2O60909 372 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 TNFRSF21O75509 655 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 APOL3O95236 402 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 NTN1O95631 604 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 CELA2BP08218 269 aaPredicted RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 C7P10643 843 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 CCNA2P20248 432 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 HTR1BP28222 390 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 NTSP30990 170 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 KRT20P35900 424 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 TRIM23P36406 574 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 ITGA1P56199 1179 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 VBP1P61758 197 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 MVKQ03426 396 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 EPS8Q12929 822 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 SRSF5Q13243 272 aaKnown RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 ANKDD1AQ495B1 522 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 LAIR2Q6ISS4 152 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 MSANTD1Q6ZTZ1 278 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 BCDIN3DQ7Z5W3 292 aaKnown RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 UBE3DQ7Z6J8 389 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 CLIP4Q8N3C7 705 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 SIMC1Q8NDZ2 872 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 OR2L3Q8NG85 312 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 OR9A2Q8NGT5 310 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 SNRNP27Q8WVK2 155 aaKnown RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 RPL3LQ92901 407 aaKnown RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 OTULINQ96BN8 352 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 FCRL1Q96LA6 429 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 FUNDC2Q9BWH2 189 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 ZNF717Q9BY31 904 aaPredicted RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 OR51I1Q9H343 314 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 EPB41L1Q9H4G0 881 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 GLIPR2Q9H4G4 154 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 C6orf106Q9H6K1 298 aaPredicted RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 SLC6A20Q9NP91 592 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 C8orf4Q9NR00 106 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 WDR70Q9NW82 654 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 RHBDL2Q9NX52 303 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 SPATA7Q9P0W8 599 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 CD207Q9UJ71 328 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 ENTPD4Q9Y227 616 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 TRBV4-1A0A0J9YWV2 114 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 OR6C74A6NCV1 312 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 ADAMDEC1O15204 470 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 MAGEB3O15480 346 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 DNAJB6O75190 326 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 CDC123O75794 336 aaPredicted RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 BCL10O95999 233 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 HPRP00739 348 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 HMGN2P05204 90 aaKnown RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 UQCRC2P22695 453 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 MAOBP27338 520 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 CALRP27797 417 aaKnown RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 RPL3P39023 403 aaKnown RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 MC3RP41968 323 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 MAGEA2P43356 314 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 EMX1Q04741 257 aaPredicted RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 DUSP2Q05923 314 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 RFX4Q33E94 735 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 KDM4DQ6B0I6 523 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 REEP3Q6NUK4 255 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 SNX29P2Q8IUI4 249 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 ARMC8Q8IUR7 673 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 CCDC71Q8IV32 467 aaPredicted RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 ERI1Q8IV48 349 aaKnown RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 SETD9Q8NE22 299 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 HDAC2Q92769 488 aaKnown RBP5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 ELSPBP1Q96BH3 223 aa5.73□□□□□ -1.49
TNFSF4-201ENST00000281834 SLC35G5Q96KT7 338 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms