RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 B4DXG7 233 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 ZNF197O14709 1029 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 POP4O95707 220 aaKnown RBP26.15■■□□□ 1.78
CBX4-201ENST00000269397 ELAVL4P26378 380 aaKnown RBP26.15■■□□□ 1.78
CBX4-201ENST00000269397 PYDC2Q56P42 97 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 FAM71E1Q6IPT2 247 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 REEP3Q6NUK4 255 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 TCTN3Q6NUS6 607 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 ABI3BPQ7Z7G0 1075 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 SLC38A5Q8WUX1 472 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 NECTIN4Q96NY8 510 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 POLR2J3Q9H1A7 115 aaKnown RBP26.15■■□□□ 1.78
CBX4-201ENST00000269397 IL21Q9HBE4 155 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 STARD7Q9NQZ5 370 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 KCND3Q9UK17 655 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 PLXND1Q9Y4D7 1925 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 ADAP00813 363 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 URODP06132 367 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 NPPBP16860 134 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 ENDOUP21128 410 aaKnown RBP26.15■■□□□ 1.78
CBX4-201ENST00000269397 MYL9P24844 172 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 GABRR2P28476 465 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 TARDBPQ13148 414 aaKnown RBP eCLIP26.15■■□□□ 1.78
CBX4-201ENST00000269397 PDE7AQ13946 482 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 NCF4Q15080 339 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 FLYWCH1Q4VC44 716 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 DCST1Q5T197 706 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 ASTLQ6HA08 431 aaPredicted RBP26.15■■□□□ 1.78
CBX4-201ENST00000269397 C2orf73Q8N5S3 287 aaPredicted RBP26.15■■□□□ 1.78
CBX4-201ENST00000269397 SLC25A46Q96AG3 418 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 WDFY2Q96P53 400 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 GPBP1L1Q9HC44 474 aaPredicted RBP26.15■■□□□ 1.78
CBX4-201ENST00000269397 MIEF1Q9NQG6 463 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 GULP1Q9UBP9 304 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 PLEKHB1Q9UF11 243 aaPredicted RBP26.15■■□□□ 1.78
CBX4-201ENST00000269397 DNMT3AQ9Y6K1 912 aaPredicted RBP26.15■■□□□ 1.78
CBX4-201ENST00000269397 CKAP5Q14008 2032 aa26.15■■□□□ 1.78
CBX4-201ENST00000269397 ANKDD1BA6NHY2 528 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 C5orf58C9J3I9 102 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 TSPAN19P0C672 248 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 LSM11P83369 360 aaKnown RBP eCLIP26.14■■□□□ 1.781e-6■■■■■ 28.9
CBX4-201ENST00000269397 GALK2Q01415 458 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 ZDHHC20Q5W0Z9 365 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 OR4D11Q8NGI4 311 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 CREB3L4Q8TEY5 395 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 IGSF21Q96ID5 467 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 GDF15Q99988 308 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 RRAGCQ9HB90 399 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 C5AR2Q9P296 337 aa26.14■■□□□ 1.78
CBX4-201ENST00000269397 RPL36Q9Y3U8 105 aaKnown RBP26.14■■□□□ 1.78
CBX4-201ENST00000269397 PIPSLA2A3N6 862 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 SDC2P34741 201 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 ETV5P41161 510 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 ETV1P50549 477 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 ILKQ13418 452 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 CCDC58Q4VC31 144 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 ATAT1Q5SQI0 421 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 CCDC149Q6ZUS6 474 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 HMGN2P46Q86SG4 172 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 NELL2Q99435 816 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 ABCG4Q9H172 646 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 TAAR2Q9P1P5 351 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 MALT1Q9UDY8 824 aa26.14■■□□□ 1.77
CBX4-201ENST00000269397 IQCMA0A1B0GVH7 501 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 A0A1W2PQ45 241 aaPredicted RBP26.13■■□□□ 1.77
CBX4-201ENST00000269397 A0A1W2PQY0 241 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 PRKYO43930 277 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 SH3BP5O60239 455 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 KIR2DL3P43628 341 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 HEPACAMQ14CZ8 416 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 GDPGP1Q6ZNW5 385 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 APOBEC4Q8WW27 367 aaKnown RBP26.13■■□□□ 1.77
CBX4-201ENST00000269397 HS3ST2Q9Y278 367 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 SPIN1Q9Y657 262 aaPredicted RBP26.13■■□□□ 1.77
CBX4-201ENST00000269397 SLC35F4A4IF30 521 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 POLR2EP19388 210 aaKnown RBP26.13■■□□□ 1.77
CBX4-201ENST00000269397 ITGB7P26010 798 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 GPC1P35052 558 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 GSTM5P46439 218 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 EPHB3P54753 998 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 C1DQ13901 141 aaKnown RBP26.13■■□□□ 1.77
CBX4-201ENST00000269397 OR2G6Q5TZ20 316 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 MEDAGQ5VYS4 303 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 GDPD4Q6W3E5 623 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 MEX3DQ86XN8 651 aaKnown RBP26.13■■□□□ 1.77
CBX4-201ENST00000269397 SIMC1Q8NDZ2 872 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 TMEM19Q96HH6 336 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 MVB12BQ9H7P6 319 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 TOR4AQ9NXH8 423 aa26.13■■□□□ 1.77
CBX4-201ENST00000269397 RFXAPO00287 272 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 ASAH1Q13510 395 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 TMEM220Q6QAJ8 160 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 GAREM2Q75VX8 874 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 METTL3Q86U44 580 aaKnown RBP26.12■■□□□ 1.77
CBX4-201ENST00000269397 CADM2Q8N3J6 435 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 PROKR2Q8NFJ6 384 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 SCLYQ96I15 445 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 NLNQ9BYT8 704 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 MTG2Q9H4K7 406 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 ARRDC5A6NEK1 342 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms