RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PLCL2Q9UPR0 1127 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 PCDHB1Q9Y5F3 818 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 ARPC5O15511 151 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 MRPS14O60783 128 aaKnown RBP15.56■□□□□ 0.08
GPC1-201ENST00000264039 SIX6O95475 246 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 S100A9P06702 114 aaKnown RBP15.56■□□□□ 0.08
GPC1-201ENST00000264039 MAGEA2P43356 314 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 MANFP55145 182 aaKnown RBP15.56■□□□□ 0.08
GPC1-201ENST00000264039 RBBP4Q09028 425 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 PIN1Q13526 163 aaPredicted RBP15.56■□□□□ 0.08
GPC1-201ENST00000264039 AANATQ16613 207 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 GLRX5Q86SX6 157 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 UMODL1-AS1Q8N2C9 162 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 OR8K5Q8NH50 307 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 POP5Q969H6 163 aaKnown RBP15.56■□□□□ 0.08
GPC1-201ENST00000264039 NXPE2Q96DL1 559 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 SLC38A2Q96QD8 506 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 OR10A4Q9H209 315 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 OR51B5Q9H339 312 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 GKN1Q9NS71 199 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 EDARQ9UNE0 448 aa15.56■□□□□ 0.08
GPC1-201ENST00000264039 MN1Q10571 1320 aaPredicted RBP15.56■□□□□ 0.08
GPC1-201ENST00000264039 LOC285095A0A1B0GVY8 99 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 MMP2P08253 660 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 THPOP40225 353 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 ERVK-25P63136 954 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 COX20Q5RI15 118 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 PPTC7Q8NI37 304 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 LKAAEAR1Q8TD35 194 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 CREB3L4Q8TEY5 395 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 PIGUQ9H490 435 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 TRPM5Q9NZQ8 1165 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 ALPK2Q86TB3 2170 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 CCDC88CQ9P219 2028 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 A0A0A6YYJ9 748 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 SIGLEC5O15389 551 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 HCN1O60741 890 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 PER3P56645 1201 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 MC1RQ01726 317 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 SIGLEC14Q08ET2 396 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 IHHQ14623 411 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 ANXA8L1Q5VT79 327 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 CEACAM20Q6UY09 585 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 IQCHQ86VS3 1027 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 OR10H4Q8NGA5 316 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 METTL2AQ96IZ6 378 aaKnown RBP15.55■□□□□ 0.08
GPC1-201ENST00000264039 OR51V1Q9H2C8 321 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 C17orf102A2RUQ5 167 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 OR6C74A6NCV1 312 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 H1F0P07305 194 aaKnown RBP15.55■□□□□ 0.08
GPC1-201ENST00000264039 TRAPPC2P0DI81 140 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 TRAPPC2BP0DI82 140 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 ETV6P41212 452 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 ERVK-21P61565 698 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 KIAA1841Q6NSI8 718 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 LIPIQ6XZB0 460 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 RTL4Q6ZR62 310 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 SERPINA11Q86U17 422 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 MOSPD2Q8NHP6 518 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 DNAJB8Q8NHS0 232 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 PDLIM5Q96HC4 596 aaKnown RBP15.55■□□□□ 0.08
GPC1-201ENST00000264039 EPYCQ99645 322 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 SCML1Q9UN30 329 aa15.55■□□□□ 0.08
GPC1-201ENST00000264039 RUVBL1Q9Y265 456 aaKnown RBP15.55■□□□□ 0.08
GPC1-201ENST00000264039 TRBV4-1A0A0J9YWV2 114 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 GRXCR2A6NFK2 248 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 MTRF1O75570 445 aaKnown RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 HLA-DPB1P04440 258 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 OR56A5P0C7T3 313 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 PPIBP23284 216 aaKnown RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 PTGER1P34995 402 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 YBEYP58557 167 aaPredicted RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 ATXN7L3Q14CW9 347 aaPredicted RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 METTL2BQ6P1Q9 378 aaKnown RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 SBSNQ6UWP8 590 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 SCD5Q86SK9 330 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 OR8J1Q8NGP2 316 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 IFT46Q9NQC8 304 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 CORO2BQ9UQ03 480 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 MGAT4BQ9UQ53 548 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 HRH3Q9Y5N1 445 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 SPDEFO95238 335 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 RAB36O95755 333 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 MT-ND4P03905 459 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 RAF1P04049 648 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 TIAL1Q01085 375 aaKnown RBP eCLIP15.54■□□□□ 0.08
GPC1-201ENST00000264039 SNTB2Q13425 540 aaKnown RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 ZNF852Q6ZMS4 543 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 GPRC5AQ8NFJ5 357 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 EXOSC8Q96B26 276 aaKnown RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 PGAP3Q96FM1 320 aaPredicted RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 C16orf70Q9BSU1 422 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 BRD9Q9H8M2 597 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 COPS3Q9UNS2 423 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 PRSS21Q9Y6M0 314 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 NHSL1Q5SYE7 1610 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 KIAA1217Q5T5P2 1943 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 TOR1AO14656 332 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 CELF2O95319 508 aaKnown RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 SRPRAP08240 638 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms