RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 H3BQ06 376 aaPredicted RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 SLC16A5O15375 505 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 DYRK3O43781 588 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 SLC28A2O43868 658 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 CSO75390 466 aaKnown RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 POP7O75817 140 aaKnown RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 C8orf89P0DMQ9 161 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 OR12D1P0DN82 309 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 CYP2A6P11509 494 aaPredicted RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 SDHBP21912 280 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 UGT2B10P36537 528 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 GPR1P46091 355 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 INSL4Q14641 139 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 CCDC85BQ15834 202 aaPredicted RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 CDKL4Q5MAI5 379 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 HIST2H2AA3Q6FI13 130 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 CASP12Q6UXS9 341 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 LIPIQ6XZB0 460 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 PARS2Q7L3T8 475 aaKnown RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 TMC8Q8IU68 726 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 DENND6BQ8NEG7 585 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 IL17RDQ8NFM7 739 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 GPR32P1Q8NGA4 272 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 OR56A3Q8NH54 315 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 SLC5A11Q8WWX8 675 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 IRF7Q92985 503 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 NDEL1Q9GZM8 345 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 POLR2J3Q9H1A7 115 aaKnown RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 SP140LQ9H930 580 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 SMURF1Q9HCE7 757 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 TBC1D24Q9ULP9 559 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 CORO2BQ9UQ03 480 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 ANGPT4Q9Y264 503 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 KLHL20Q9Y2M5 609 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 WBP11Q9Y2W2 641 aaKnown RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 PEX16Q9Y5Y5 336 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 PLXNB3Q9ULL4 1909 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 SAGE2PA6NJ88 616 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 HIDE1A8MVS5 230 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 TAF4O00268 1085 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 IDH3BO43837 385 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 HBQ1P09105 142 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 ITGA2P17301 1181 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 SYN1P17600 705 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 CBLP22681 906 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 PPIBP23284 216 aaKnown RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 XKP51811 444 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 MAPK12P53778 367 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 PTPN5P54829 565 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 DEFA1P59665 94 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 DEFA3P59666 94 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 FAM131AQ6UXB0 335 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 USP30Q70CQ3 517 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 ADGRF3Q8IZF5 1079 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 OXR1Q8N573 874 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 KREMEN2Q8NCW0 462 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 NLGN4YQ8NFZ3 816 aaPredicted RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 GATAD2BQ8WXI9 593 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 KLK6Q92876 244 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 ZSCAN5AQ9BUG6 496 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 TSSK6Q9BXA6 273 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 CPEB1Q9BZB8 566 aaKnown RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 BHLHE41Q9C0J9 482 aaPredicted RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 BRF2Q9HAW0 419 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 RC3H2Q9HBD1 1191 aaKnown RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 EQTNQ9NQ60 294 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 KLHL3Q9UH77 587 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 IL36AQ9UHA7 158 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 A0A1W2PQ09 198 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 A0A1W2PS29 197 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 PRKYO43930 277 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 LZTS3O60299 673 aaPredicted RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 B4GALT2O60909 372 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 ERAL1O75616 437 aaKnown RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 NCR1O76036 304 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 CD79BP40259 229 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 NNMTP40261 264 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 RAB25P57735 213 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 ZNF45Q02386 682 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 HNRNPA0Q13151 305 aaKnown RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 SLAMF1Q13291 335 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 SPHARQ15513 63 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 ATAT1Q5SQI0 421 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 DCST1Q5T197 706 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 ATAD3CQ5T2N8 411 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 C1QTNF12Q5T7M4 302 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 PLPP4Q5VZY2 271 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 TYW3Q6IPR3 259 aaKnown RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 TCTN3Q6NUS6 607 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 TRAM1L1Q8N609 369 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 SLC7A13Q8TCU3 470 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 C1GALT1C1Q96EU7 318 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 TXNDC15Q96J42 360 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 LMLNQ96KR4 655 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 UCK2Q9BZX2 261 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 XKR8Q9H6D3 395 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 PLCXD1Q9NUJ7 323 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 TEX10Q9NXF1 929 aaPredicted RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 SEC14L3Q9UDX4 400 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 FTSJ1Q9UET6 329 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms