RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 RFXAPO00287 272 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 SEMA7AO75326 666 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 YES1P07947 543 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 HLA-FP30511 346 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 GPC1P35052 558 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 CAP1Q01518 475 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 KCNC3Q14003 757 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 OR2G6Q5TZ20 316 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 HORMAD2Q8N7B1 307 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 NANOGP1Q8N7R0 232 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 RASGEF1AQ8N9B8 481 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 RNF170Q96K19 258 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 NDUFB11Q9NX14 153 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 COMMD3Q9UBI1 195 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 GPSM3Q9Y4H4 160 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 AP1M2Q9Y6Q5 423 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 PLXND1Q9Y4D7 1925 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 HEPACAM2A8MVW5 462 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 URODP06132 367 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 KIR2DL3P43628 341 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 PCBP3P57721 371 aaKnown RBP16.61■□□□□ 0.25
TRAM1-201ENST00000262213 LSM11P83369 360 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRAM1-201ENST00000262213 HEPACAMQ14CZ8 416 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 REEP3Q6NUK4 255 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 ERAP2Q6P179 960 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 SHFQ7M4L6 423 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 VN1R5Q7Z5H4 357 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 OR7G1Q8NGA0 311 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 GOT1L1Q8NHS2 421 aaPredicted RBP16.61■□□□□ 0.25
TRAM1-201ENST00000262213 FRMD6Q96NE9 622 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 RSPO3Q9BXY4 272 aaPredicted RBP16.61■□□□□ 0.25
TRAM1-201ENST00000262213 RACGAP1Q9H0H5 632 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 IRF2BPLQ9H1B7 796 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 LINC00597Q9H2U6 94 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 GULP1Q9UBP9 304 aa16.61■□□□□ 0.25
TRAM1-201ENST00000262213 RPL36Q9Y3U8 105 aaKnown RBP16.61■□□□□ 0.25
TRAM1-201ENST00000262213 TRAV19A0A0A6YYK7 116 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 PRKYO43930 277 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 MSL3P1P0C860 447 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 PIPP12273 146 aaPredicted RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 ETV5P41161 510 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 ETV1P50549 477 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 ZNF33BQ06732 778 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 GPNMBQ14956 572 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 SIMC1Q8NDZ2 872 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 ATP6V1C2Q8NEY4 427 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 GPR32P1Q8NGA4 272 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 ZNF480Q8WV37 535 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 OTUB1Q96FW1 271 aaPredicted RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 TM9SF2Q99805 663 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 ACAT2Q9BWD1 397 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 NLNQ9BYT8 704 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 MTG2Q9H4K7 406 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 RNF121Q9H920 327 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 SEMA3GQ9NS98 782 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 CLCA3PQ9Y6N3 262 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 A8MVJ9 347 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 CCNYL3P0C7X3 344 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 ELAVL4P26378 380 aaKnown RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 APEX1P27695 318 aaKnown RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 GABRR2P28476 465 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 SNRPD2P62316 118 aaKnown RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 RPS25P62851 125 aaKnown RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 GLYR1Q49A26 553 aaPredicted RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 LSRQ86X29 649 aaPredicted RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 VWA5B2Q8N398 1253 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 SLC38A5Q8WUX1 472 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 JPH3Q8WXH2 748 aaPredicted RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 SLC25A46Q96AG3 418 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 TMEM19Q96HH6 336 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 C19orf43Q9BQ61 176 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 ABCG4Q9H172 646 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 MVB12BQ9H7P6 319 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 DMRT3Q9NQL9 472 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 PLEKHB1Q9UF11 243 aaPredicted RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 MAPRE3Q9UPY8 281 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 TMEM88BA6NKF7 163 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 SMLR1H3BR10 107 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 TNFRSF10AO00220 468 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 RTCAO00442 366 aaKnown RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 ALX3O95076 343 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 ADAP00813 363 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 PSKH1P11801 424 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 PIN1Q13526 163 aaPredicted RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 NFE2L1Q14494 772 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 NCF4Q15080 339 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 QPRTQ15274 297 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 SAXO2Q658L1 398 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 TMEM220Q6QAJ8 160 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 OR4D11Q8NGI4 311 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 OR56A3Q8NH54 315 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 CREB3L4Q8TEY5 395 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 GATAD2BQ8WXI9 593 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 FOPNLQ96NB1 174 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 NDRG2Q9UN36 371 aaKnown RBP16.6■□□□□ 0.25
TRAM1-201ENST00000262213 DYRK1BQ9Y463 629 aa16.6■□□□□ 0.25
TRAM1-201ENST00000262213 PIPSLA2A3N6 862 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 KLHL18O94889 574 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 POP4O95707 220 aaKnown RBP16.59■□□□□ 0.25
TRAM1-201ENST00000262213 SELPP16109 830 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms