RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SLC9A6Q92581 669 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 FATE1Q969F0 183 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 EPYCQ99645 322 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 GPA33Q99795 319 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 OR2B2Q9GZK3 357 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 ZDHHC3Q9NYG2 299 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 HELZP42694 1942 aaKnown RBP12.37□□□□□ -0.43
SNX1-201ENST00000261889 TRAV6A0A075B6T7 132 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 A0A1W2PPK0 400 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 FEZF1A0PJY2 475 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 ZC3H12DA2A288 527 aaKnown RBP12.37□□□□□ -0.43
SNX1-201ENST00000261889 B4DXG7 233 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 RECKO95980 971 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 GALTP07902 379 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 PSMA1P25786 263 aaKnown RBP12.37□□□□□ -0.43
SNX1-201ENST00000261889 EFR3AQ14156 821 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 ZNF750Q32MQ0 723 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 GPAT3Q53EU6 434 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 UNC5DQ6UXZ4 953 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 NOXA1Q86UR1 476 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 REPS1Q96D71 796 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 C1QTNF6Q9BXI9 259 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 SLC12A9Q9BXP2 914 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 CCL26Q9Y258 94 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 POFUT2Q9Y2G5 429 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 NTNG1Q9Y2I2 539 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 CAPN5O15484 640 aaPredicted RBP12.36□□□□□ -0.43
SNX1-201ENST00000261889 RPLP2P05387 115 aaKnown RBP12.36□□□□□ -0.43
SNX1-201ENST00000261889 ZDHHC11BP0C7U3 371 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 POU3F3P20264 500 aaPredicted RBP12.36□□□□□ -0.43
SNX1-201ENST00000261889 EVI2BP34910 448 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 UGT2B10P36537 528 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 CRYBB2P43320 205 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 RBBP4Q09028 425 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 MTAPQ13126 283 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 IL18Q14116 193 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 CDKN3Q16667 212 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 ZNF791Q3KP31 576 aaPredicted RBP12.36□□□□□ -0.43
SNX1-201ENST00000261889 ZNF57Q68EA5 555 aaPredicted RBP12.36□□□□□ -0.43
SNX1-201ENST00000261889 ELMOD2Q8IZ81 293 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 VPS37AQ8NEZ2 397 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 XAGE5Q8WWM1 108 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 SLC7A6Q92536 515 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 PPCDCQ96CD2 204 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 SRRQ9GZT4 340 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 B3GAT2Q9NPZ5 323 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 STOX2Q9P2F5 926 aaPredicted RBP12.36□□□□□ -0.43
SNX1-201ENST00000261889 TRPC4Q9UBN4 977 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 MKLN1Q9UL63 735 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 HCN4Q9Y3Q4 1203 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 A0A1W2PS29 197 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 PLA2G10O15496 165 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 ATP1B2P14415 290 aaPredicted RBP12.36□□□□□ -0.43
SNX1-201ENST00000261889 SERPINA4P29622 427 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 SLC6A12P48065 614 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 LARS2Q15031 903 aaKnown RBP12.36□□□□□ -0.43
SNX1-201ENST00000261889 SAXO2Q658L1 398 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 DNAJB7Q7Z6W7 309 aaPredicted RBP12.36□□□□□ -0.43
SNX1-201ENST00000261889 HORMAD2Q8N7B1 307 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 BMPERQ8N8U9 685 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 BEST4Q8NFU0 473 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 OR7G1Q8NGA0 311 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 OR4C15Q8NGM1 316 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 TM9SF4Q92544 642 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 LRR1Q96L50 414 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 VN1R3Q9BXE9 311 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 SLC6A16Q9GZN6 736 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 SLAMF7Q9NQ25 335 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 MIEF1Q9NQG6 463 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 CNIH4Q9P003 139 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 ERVW-1Q9UQF0 538 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 HSPE1-MOB4S4R3N1 261 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 FADS2P1A8MWK0 482 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 TOXO94900 526 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 LALBAP00709 142 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 MSL3P1P0C860 447 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 OR12D1P0DN82 309 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 RORCP51449 518 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 FAM27D1Q5T7N8 215 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 KIAA1161Q6NSJ0 714 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 ACSM5Q6NUN0 579 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 ADAMTS19Q8TE59 1207 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 FCGR1BQ92637 280 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 MAP6Q96JE9 813 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 PLA2G12AQ9BZM1 189 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 CXorf36Q9H7Y0 433 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 EQTNQ9NQ60 294 aa12.36□□□□□ -0.43
SNX1-201ENST00000261889 A0A1W2PQ72 361 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 CIB4A0PJX0 185 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 SHISA3A0PJX4 238 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 FAM183AA6NL82 134 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 HEPACAM2A8MVW5 462 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 ISM1B1AKI9 464 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 K7ESM1 405 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 PSMB5P28074 263 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 SSTR2P30874 369 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 PSPHP78330 225 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 GPNMBQ14956 572 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 SYPL1Q16563 259 aa12.35□□□□□ -0.43
SNX1-201ENST00000261889 CASP12Q6UXS9 341 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms