RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 KMOO15229 486 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 PRNPP04156 253 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 SCG5P05408 212 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 IGFBP1P08833 259 aaPredicted RBP14.48□□□□□ -0.09
DDX56-201ENST00000258772 LINC00271P0C7V0 271 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 CSF2RAP15509 400 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 ELAVL4P26378 380 aaKnown RBP14.48□□□□□ -0.09
DDX56-201ENST00000258772 FEN1P39748 380 aaKnown RBP14.48□□□□□ -0.09
DDX56-201ENST00000258772 MAPK12P53778 367 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 KRR1Q13601 381 aaKnown RBP14.48□□□□□ -0.09
DDX56-201ENST00000258772 DHCR24Q15392 516 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 DCST1Q5T197 706 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 KHDRBS2Q5VWX1 349 aaKnown RBP14.48□□□□□ -0.09
DDX56-201ENST00000258772 CCBE1Q6UXH8 406 aaPredicted RBP14.48□□□□□ -0.09
DDX56-201ENST00000258772 FAM92BQ6ZTR7 304 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 ZNF765Q7L2R6 523 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 GDPD3Q7L5L3 318 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 C6orf120Q7Z4R8 191 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 AKAP14Q86UN6 197 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 SCAIQ8N9R8 606 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 OR5AR1Q8NGP9 310 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 SLC35B4Q969S0 331 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 ARRDC3Q96B67 414 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 F2RL3Q96RI0 385 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 KCNS3Q9BQ31 491 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 OR52A5Q9H2C5 316 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 HHATLQ9HCP6 504 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 MGAT4BQ9UQ53 548 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 LAMA3Q16787 3333 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 MMP20O60882 483 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 SOX14O95416 240 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 C6P13671 934 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 KELP23276 732 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 BSGP35613 385 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 MNX1P50219 401 aaPredicted RBP14.48□□□□□ -0.09
DDX56-201ENST00000258772 NTHL1P78549 312 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.48□□□□□ -0.09
DDX56-201ENST00000258772 SLX4IPQ5VYV7 408 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 C11orf96Q7Z7L8 435 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 SDHCQ99643 169 aaPredicted RBP14.48□□□□□ -0.09
DDX56-201ENST00000258772 RHBGQ9H310 441 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 POU2F3Q9UKI9 436 aa14.48□□□□□ -0.09
DDX56-201ENST00000258772 LSM2Q9Y333 95 aaKnown RBP14.48□□□□□ -0.09
DDX56-201ENST00000258772 CKAP5Q14008 2032 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 A0A075B6Q4 140 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 LOC110117498-PIK3R3F6TDL0 507 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 PDPK1O15530 556 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 LZTS3O60299 673 aaPredicted RBP14.47□□□□□ -0.09
DDX56-201ENST00000258772 OR10H3O60404 316 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 TBX19O60806 448 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 B4GALT2O60909 372 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 COQ9O75208 318 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 SEMA3DO95025 777 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 OXSR1O95747 527 aaPredicted RBP14.47□□□□□ -0.09
DDX56-201ENST00000258772 ITGB8P26012 769 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 CSTF2P33240 577 aaKnown RBP eCLIP14.47□□□□□ -0.09
DDX56-201ENST00000258772 HOXD12P35452 270 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 OPRD1P41143 372 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 DPTQ07507 201 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 HEPACAMQ14CZ8 416 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 NCF4Q15080 339 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 MEDAGQ5VYS4 303 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 C17orf64Q86WR6 236 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 RBM45Q8IUH3 476 aaKnown RBP14.47□□□□□ -0.09
DDX56-201ENST00000258772 NATD1Q8N6N6 113 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 ANKRD53Q8N9V6 530 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 KLHL6Q8WZ60 621 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 PIK3R3Q92569 461 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 DHRS1Q96LJ7 313 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 NRTNQ99748 197 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 CNPPD1Q9BV87 410 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 DNAJC27Q9NZQ0 273 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 C5AR2Q9P296 337 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 CLEC2DQ9UHP7 191 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 WBP11Q9Y2W2 641 aaKnown RBP14.47□□□□□ -0.09
DDX56-201ENST00000258772 PRKAB1Q9Y478 270 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 PCYT1BQ9Y5K3 369 aaPredicted RBP14.47□□□□□ -0.09
DDX56-201ENST00000258772 HMGN4O00479 90 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 FAAHO00519 579 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 SH3BP5O60239 455 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 H1F0P07305 194 aaKnown RBP14.47□□□□□ -0.09
DDX56-201ENST00000258772 ACRP10323 421 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 CKMT1AP12532 417 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 CD72P21854 359 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 ITGB7P26010 798 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 KCNJ5P48544 419 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 XKP51811 444 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 PCBP4P57723 403 aaKnown RBP14.47□□□□□ -0.09
DDX56-201ENST00000258772 DEFA1P59665 94 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 DEFA3P59666 94 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 HSPB3Q12988 150 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 TMEM201Q5SNT2 666 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 DEF8Q6ZN54 512 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 WDR53Q7Z5U6 358 aaPredicted RBP14.47□□□□□ -0.09
DDX56-201ENST00000258772 C12orf40Q86WS4 652 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 OR4D11Q8NGI4 311 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 TMEM80Q96HE8 168 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 ZNF354BQ96LW1 612 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 WFDC6Q9BQY6 131 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 MS4A8Q9BY19 250 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms