RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SGCGQ13326 291 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 PUM1Q14671 1186 aaKnown RBP eCLIP17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 SPDYE7PQ495Y7 208 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 RPLP0P6Q8NHW5 317 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 OR5P2Q8WZ92 322 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 PIP5K1AQ99755 562 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 RAD21L1Q9H4I0 556 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 PREBQ9HCU5 417 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 PRDM8Q9NQV8 689 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 ACER3Q9NUN7 267 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 GPSM3Q9Y4H4 160 aa17.75■□□□□ 0.43
PDLIM4-201ENST00000253754 GLOD5A6NK44 160 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 C4orf51C9J302 202 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 PSMB9P28065 219 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 RAB28P51157 221 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 DGKEP52429 567 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 AGERQ15109 404 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 TBC1D25Q3MII6 688 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 KIAA1161Q6NSJ0 714 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 REEP3Q6NUK4 255 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 ZNF793Q6ZN11 406 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 SZRD1Q7Z422 152 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 ANKRD13BQ86YJ7 626 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 CCDC103Q8IW40 242 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 B4GALNT2Q8NHY0 566 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 CREB3L4Q8TEY5 395 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 GTPBP3Q969Y2 492 aaKnown RBP17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 RGMAQ96B86 450 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 TMEM19Q96HH6 336 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 BTBD1Q9H0C5 482 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 SLC6A14Q9UN76 642 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 PDZK1P1A8MUH7 402 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 MAGEB3O15480 346 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 SH3BP5O60239 455 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 DNAJB5O75953 348 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 TFPTP0C1Z6 253 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 BCL6P41182 706 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 IDH2P48735 452 aaKnown RBP17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 MRPS21P82921 87 aaKnown RBP17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 PRDX1Q06830 199 aaKnown RBP17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 DMPKQ09013 629 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 TP53BP2Q13625 1128 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 ELOAQ14241 798 aaKnown RBP17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 MAPK11Q15759 364 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 C6orf120Q7Z4R8 191 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 ARMC8Q8IUR7 673 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 NLGN4XQ8N0W4 816 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 OR52E1Q8NGJ3 308 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 OTUB1Q96FW1 271 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 PDXPQ96GD0 296 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 SERHL2Q9H4I8 314 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 SYNPO2LQ9H987 977 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 ACOT13Q9NPJ3 140 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 IRAK4Q9NWZ3 460 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 SELENONQ9NZV5 590 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 KLHL20Q9Y2M5 609 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 PCDHGA2Q9Y5H1 932 aa17.74■□□□□ 0.43
PDLIM4-201ENST00000253754 LCKP06239 509 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 ACVR2AP27037 513 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 GGT2P36268 569 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 SSR2P43308 183 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 RXRGP48443 463 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 NUDT6P53370 316 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 RPS21P63220 83 aaKnown RBP17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 MVKQ03426 396 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 KRT33BQ14525 404 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 OLIG3Q7RTU3 272 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 FAM3CQ92520 227 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 HLA-CQ95604 372 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 SIPA1Q96FS4 1042 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 DPH7Q9BTV6 452 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 C1QTNF2Q9BXJ5 285 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 SLC17A9Q9BYT1 436 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 SCHIP1Q9P0W5 487 aaPredicted RBP17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 LRIT2A6NDA9 550 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 SHISA7A6NL88 538 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 C5orf58C9J3I9 102 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 J3QRK9 145 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 HMGN4O00479 90 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 FFAR1O14842 300 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 SLC31A1O15431 190 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 IFNA14P01570 189 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 ITGA2P17301 1181 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 PKLRP30613 574 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 BMXP51813 675 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 LIM2P55344 173 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 SMAD2Q15796 467 aaKnown RBP17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 OR4C11Q6IEV9 310 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 ZNF605Q86T29 641 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 FBXL6Q8N531 539 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 GPR32P1Q8NGA4 272 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 NDNFQ8TB73 568 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 UTP15Q8TED0 518 aaKnown RBP17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 PROX1Q92786 737 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 WFDC6Q9BQY6 131 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 FBRSQ9HAH7 460 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 SLC6A20Q9NP91 592 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 NDRG2Q9UN36 371 aaKnown RBP17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 ENPP4Q9Y6X5 453 aa17.73■□□□□ 0.43
PDLIM4-201ENST00000253754 A0A0A6YYD5 115 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms