RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 RACGAP1Q9H0H5 632 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 P2RY12Q9H244 342 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 SRMSQ9H3Y6 488 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 AHCTF1Q8WYP5 2266 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 SAGE2PA6NJ88 616 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 FAM183AA6NL82 134 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 GFRA2O00451 464 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 PGRMC2O15173 223 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 SCN2BO60939 215 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 NOS1APO75052 506 aaPredicted RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 ETHE1O95571 254 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 C7P10643 843 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 TIMP2P16035 220 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 CSNK2A2P19784 350 aaPredicted RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 IMPA1P29218 277 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 METAP1P53582 386 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 MVKQ03426 396 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 ACVR1Q04771 509 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 SLAMF1Q13291 335 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 SLC14A2Q15849 920 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 SYPL1Q16563 259 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 MTFR2Q6P444 385 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 SYCE2Q6PIF2 218 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 FAM46DQ8NEK8 389 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 FCGR1BQ92637 280 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 PMEPA1Q969W9 287 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 RIPOR3Q96MK2 946 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 OR5M11Q96RB7 305 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 CENPOQ9BU64 300 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 KRCC1Q9NPI7 259 aaPredicted RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 BOLA1Q9Y3E2 137 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 DOCK1Q14185 1865 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 TPRP12270 2363 aaKnown RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 BRWD3Q6RI45 1802 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 CD8B2A6NJW9 211 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 BTN3A3O00478 584 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 ENTPD6O75354 484 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 PTHP01270 115 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 CD8BP10966 210 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 DCKP27707 260 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 CLK3P49761 638 aaKnown RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 SUOXP51687 545 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 SELENOWP63302 87 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 ZNF155Q12901 538 aaPredicted RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 ZNF750Q32MQ0 723 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 TBC1D25Q3MII6 688 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 NCCRP1Q6ZVX7 275 aaPredicted RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 RBM45Q8IUH3 476 aaKnown RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 TRAM1L1Q8N609 369 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 COX18Q8N8Q8 333 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 GATSQ8NAP1 163 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 OVCA2Q8WZ82 227 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 ZNF300Q96RE9 604 aaPredicted RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 KXD1Q9BQD3 176 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 IKZF2Q9UKS7 526 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 SARDHQ9UL12 918 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 NEU3Q9UQ49 428 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 PCDHGA10Q9Y5H3 936 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 MYOFQ9NZM1 2061 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 NPIPA5A0A0B4J1W7 369 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 NPIPA7E9PJI5 369 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 NPIPA8P0DM63 369 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 SLC30A6Q6NXT4 461 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 NXPE4Q6UWF7 544 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 ANKRD13BQ86YJ7 626 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 TCEAL8Q8IYN2 117 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 TMEFF1Q8IYR6 380 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 FAM83FQ8NEG4 500 aaPredicted RBP13.07□□□□□ -0.32
NCLN-201ENST00000246117 OR4K5Q8NGD3 323 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 CHIAQ9BZP6 476 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 RMI1Q9H9A7 625 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 RC3H2Q9HBD1 1191 aaKnown RBP13.07□□□□□ -0.32
NCLN-201ENST00000246117 NCKAP1Q9Y2A7 1128 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 TCRBV5S2A0A599 114 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 MID1O15344 667 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 F11P03951 625 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 ALPPP05187 535 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 POLR2CP19387 275 aaPredicted RBP13.07□□□□□ -0.32
NCLN-201ENST00000246117 RPS3P23396 243 aaKnown RBP eCLIP13.07□□□□□ -0.325e-7■■■□□ 14.8
NCLN-201ENST00000246117 LIPAP38571 399 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 ERVFC1P60507 584 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 TIAL1Q01085 375 aaKnown RBP eCLIP13.07□□□□□ -0.321e-13■■□□□ 14.1
NCLN-201ENST00000246117 DESI1Q6ICB0 168 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 MZT2BQ6NZ67 158 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 ZNF517Q6ZMY9 492 aaPredicted RBP13.07□□□□□ -0.32
NCLN-201ENST00000246117 FAM92BQ6ZTR7 304 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 DCUN1D3Q8IWE4 304 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 PAPD5Q8NDF8 572 aaKnown RBP13.07□□□□□ -0.32
NCLN-201ENST00000246117 MMP28Q9H239 520 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 IL37Q9NZH6 218 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 LRRC37AA6NMS7 1700 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 CEP250Q9BV73 2442 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 CLCA1A8K7I4 914 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 ASGR2P07307 311 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 AQP6Q13520 282 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 C1orf61Q13536 156 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 UBE2UQ5VVX9 321 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 ZNF783Q6ZMS7 281 aa13.07□□□□□ -0.32
NCLN-201ENST00000246117 TET1Q8NFU7 2136 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms