RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 MFSD4BQ5TF39 518 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 OR52E8Q6IFG1 317 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 MED25Q71SY5 747 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 VPS33AQ96AX1 596 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 TESCQ96BS2 214 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 MIEF2Q96C03 454 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 PPCDCQ96CD2 204 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 KLHL29Q96CT2 875 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 ZNF681Q96N22 645 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 THSD1Q9NS62 852 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 SH3BP4Q9P0V3 963 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 WBP11Q9Y2W2 641 aaKnown RBP18.92■□□□□ 0.62
SNRPA-201ENST00000243563 MRPS18BQ9Y676 258 aaKnown RBP18.92■□□□□ 0.62
SNRPA-201ENST00000243563 SPACA6W5XKT8 324 aa18.92■□□□□ 0.62
SNRPA-201ENST00000243563 CAPN14A8MX76 684 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 NR5A2O00482 541 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 PRMT3O60678 531 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 CCDC22O60826 627 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 ERAL1O75616 437 aaKnown RBP18.91■□□□□ 0.62
SNRPA-201ENST00000243563 ALBP02768 609 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 POLR2JP52435 117 aaKnown RBP18.91■□□□□ 0.62
SNRPA-201ENST00000243563 OCA2Q04671 838 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 TBC1D25Q3MII6 688 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 FAAH2Q6GMR7 532 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 BLOC1S3Q6QNY0 202 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 DGAT2L6Q6ZPD8 337 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 LANCL3Q6ZV70 420 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 ZNF595Q8IYB9 648 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 ADAMTS18Q8TE60 1221 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 DOK4Q8TEW6 326 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 COQ8BQ96D53 544 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 ERP27Q96DN0 273 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 GPN3Q9UHW5 284 aaPredicted RBP18.91■□□□□ 0.62
SNRPA-201ENST00000243563 MKL2Q9ULH7 1088 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 ERVK-11Q9UQG0 969 aa18.91■□□□□ 0.62
SNRPA-201ENST00000243563 NUP214P35658 2090 aaPredicted RBP18.91■□□□□ 0.62
SNRPA-201ENST00000243563 IGKV3D-11A0A0A0MRZ8 115 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 FAM234BA2RU67 622 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 C9J4A7 227 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 TLX3O43711 291 aaPredicted RBP18.9■□□□□ 0.62
SNRPA-201ENST00000243563 TBX19O60806 448 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 SCN2BO60939 215 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 CD82P27701 267 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 TLX1P31314 330 aaPredicted RBP18.9■□□□□ 0.62
SNRPA-201ENST00000243563 FEN1P39748 380 aaKnown RBP18.9■□□□□ 0.62
SNRPA-201ENST00000243563 ACTN3Q08043 901 aaPredicted RBP18.9■□□□□ 0.62
SNRPA-201ENST00000243563 SLC13A2Q13183 592 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 RCAN2Q14206 197 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 TIGD2Q4W5G0 525 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 CAMKMTQ7Z624 323 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 POU5F2Q8N7G0 328 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 SUN3Q8TAQ9 357 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 WDR54Q9H977 334 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 WDR41Q9HAD4 459 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 SLC35C2Q9NQQ7 365 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 EHD3Q9NZN3 535 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.9■□□□□ 0.62
SNRPA-201ENST00000243563 IL17BQ9UHF5 180 aa18.9■□□□□ 0.62
SNRPA-201ENST00000243563 PTRH2Q9Y3E5 179 aaKnown RBP18.9■□□□□ 0.62
SNRPA-201ENST00000243563 CACNA1AO00555 2505 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 IDSB3KWA1 339 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 CTNSO60931 367 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 DCTN3O75935 186 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 SOX18P35713 384 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 DLSTP36957 453 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 CLNS1AP54105 237 aaKnown RBP18.89■□□□□ 0.62
SNRPA-201ENST00000243563 IGLV3-21P80748 117 aaPredicted RBP18.89■□□□□ 0.62
SNRPA-201ENST00000243563 DNASE1L3Q13609 305 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 CPTPQ5TA50 214 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 QSOX2Q6ZRP7 698 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 VASH2Q86V25 355 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 ANKRD46Q86W74 232 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 CLECL1Q8IZS7 167 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 TANKQ92844 425 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 MTERF3Q96E29 417 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 ZNF578Q96N58 590 aaPredicted RBP18.89■□□□□ 0.62
SNRPA-201ENST00000243563 PTCHD1Q96NR3 888 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 LRRC37BQ96QE4 947 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 DUSP26Q9BV47 211 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 C14orf105Q9NVL8 296 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 TAS2R7Q9NYW3 318 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 CAPN7Q9Y6W3 813 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 FRYQ5TBA9 3013 aa18.89■□□□□ 0.62
SNRPA-201ENST00000243563 MED19A0JLT2 244 aaPredicted RBP18.89■□□□□ 0.61
SNRPA-201ENST00000243563 GPR75O95800 540 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 HSD17B7P56937 341 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 PCBP4P57723 403 aaKnown RBP18.89■□□□□ 0.61
SNRPA-201ENST00000243563 TERF2Q15554 542 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 LTB4RQ15722 352 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 VPS26BQ4G0F5 336 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 SNX32Q86XE0 403 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 FAM9CQ8IZT9 166 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 OR4K14Q8NGD5 310 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 PPWD1Q96BP3 646 aaKnown RBP18.89■□□□□ 0.61
SNRPA-201ENST00000243563 ZNF764Q96H86 408 aaPredicted RBP18.89■□□□□ 0.61
SNRPA-201ENST00000243563 PRDM9Q9NQV7 894 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 ARL8BQ9NVJ2 186 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 C3orf18Q9UK00 162 aa18.89■□□□□ 0.61
SNRPA-201ENST00000243563 MRPS33Q9Y291 106 aaKnown RBP18.89■□□□□ 0.61
SNRPA-201ENST00000243563 MYO1GB0I1T2 1018 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms