RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 MRTO4Q9UKD2 239 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-201ENST00000237289 CORO2BQ9UQ03 480 aa10.51□□□□□ -0.73
TNFAIP3-201ENST00000237289 A0A0C4DFX4 3053 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 BSGP35613 385 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 C18orf63Q68DL7 685 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 DHDDSQ86SQ9 333 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 KCNE4Q8WWG9 221 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 TEX10Q9NXF1 929 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 PCDHA9Q9Y5H5 950 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 CEP192Q8TEP8 1941 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 SLC22A2O15244 555 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 COQ9O75208 318 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 SOX11P35716 441 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 DNAL1Q4LDG9 190 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 XKR7Q5GH72 579 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 FAM199XQ6PEV8 388 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 TNIP2Q8NFZ5 429 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 OR6Y1Q8NGX8 325 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 TM4SF18Q96CE8 201 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 RAB3IPQ96QF0 476 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 LHX9Q9NQ69 397 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 PRDM7Q9NQW5 492 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 EXD2Q9NVH0 621 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 PDP2Q9P2J9 529 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 AHCTF1Q8WYP5 2266 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 ARID1BQ8NFD5 2236 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 FAM227AF5H4B4 570 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 CTNSO60931 367 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 ACPPP15309 386 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 TPP2P29144 1249 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 HSD17B7P56937 341 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 DNASE1L3Q13609 305 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 C16orf62Q7Z3J2 963 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 TMPRSS9Q7Z410 1059 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 CA13Q8N1Q1 262 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 DNAJB14Q8TBM8 379 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 OR5P2Q8WZ92 322 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 DEFB126Q9BYW3 111 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 BHLHE41Q9C0J9 482 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 PRDM9Q9NQV7 894 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 MRPS2Q9Y399 296 aaKnown RBP10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 UNC80Q8N2C7 3258 aa10.5□□□□□ -0.73
TNFAIP3-201ENST00000237289 ZGLP1P0C6A0 271 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 TGM1P22735 817 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 FOLH1Q04609 750 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 ENDOVQ8N8Q3 282 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 SNIP1Q8TAD8 396 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 ARHGAP9Q9BRR9 750 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 TWSG1Q9GZX9 223 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 CCDC86Q9H6F5 360 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 PIEZO1Q92508 2521 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 NSG1A0A0A6YYJ2 146 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 IDSB3KWA1 339 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 CASC3O15234 703 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 KLK10O43240 276 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 ALOX12BO75342 701 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 C6orf47O95873 294 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 TACR1P25103 407 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 HNRNPH2P55795 449 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 RUNX2Q13950 521 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 FAM180BQ6P0A1 224 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 ADCY4Q8NFM4 1077 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 RCN3Q96D15 328 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 EHD3Q9NZN3 535 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 AP3M1Q9Y2T2 418 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 GVINP1Q7Z2Y8 2422 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 ZFC3H1O60293 1989 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 TMPRSS11DO60235 418 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 PRKAR1AP10644 381 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 ITGA3P26006 1051 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 CALRP27797 417 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 BTBD16Q32M84 506 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 PRSS41Q7RTY9 318 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 FLVCR1-AS1Q8TAF5 88 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 SCNM1Q9BWG6 230 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 PRODH2Q9UF12 536 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 KLK4Q9Y5K2 254 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 COL6A3P12111 3177 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 C17orf105B2RV13 164 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 LAMP1P11279 417 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 CCT3P49368 545 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 NRG3P56975 720 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 OVCH1Q7RTY7 1134 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 CLEC1AQ8NC01 280 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 DNAJB8Q8NHS0 232 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 RNF217Q8TC41 542 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 XAGE5Q8WWM1 108 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 NPAS2Q99743 824 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 PIF1Q9H611 641 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 SDR39U1Q9NRG7 319 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 TAS2R9Q9NYW1 312 aa10.49□□□□□ -0.73
TNFAIP3-201ENST00000237289 RNF103-CHMP3A0A140T963 221 aa10.48□□□□□ -0.73
TNFAIP3-201ENST00000237289 JRKO75564 520 aa10.48□□□□□ -0.73
TNFAIP3-201ENST00000237289 UBOX5O94941 541 aa10.48□□□□□ -0.73
TNFAIP3-201ENST00000237289 CBX6O95503 412 aa10.48□□□□□ -0.73
TNFAIP3-201ENST00000237289 ALBP02768 609 aa10.48□□□□□ -0.73
TNFAIP3-201ENST00000237289 NR2F1P10589 423 aa10.48□□□□□ -0.73
TNFAIP3-201ENST00000237289 IFNA8P32881 189 aa10.48□□□□□ -0.73
TNFAIP3-201ENST00000237289 PCBP4P57723 403 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms