RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PDGFCQ9NRA1 345 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 RNF146Q9NTX7 359 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 C14orf105Q9NVL8 296 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 PCTPQ9UKL6 214 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 OR6C75A6NL08 312 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 VEGFDO43915 354 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 KERAO60938 352 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 SOX30O94993 753 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 S1PR4O95977 384 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 SNX16P57768 344 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 LRRC74AQ0VAA2 488 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 PTGR1Q14914 329 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 UNC93AQ86WB7 457 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 OR5M9Q8NGP3 310 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 TMEM203Q969S6 136 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 WDR77Q9BQA1 342 aaPredicted RBP12.43□□□□□ -0.42
MSH2-201ENST00000233146 SPATA5L1Q9BVQ7 753 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 FN3KQ9H479 309 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 RLIMQ9NVW2 624 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 NDUFAF4Q9P032 175 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 USP21Q9UK80 565 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 CHST2Q9Y4C5 530 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 KCNQ2O43526 872 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 SSNA1O43805 119 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 HMBSP08397 361 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 UGT2B7P16662 529 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 TSPAN7P41732 249 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 RAG2P55895 527 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 ECH1Q13011 328 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 RBBP7Q16576 425 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 TTLL9Q3SXZ7 439 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 OR2B11Q5JQS5 317 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 LRIF1Q5T3J3 769 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 DHRS7BQ6IAN0 325 aaPredicted RBP12.42□□□□□ -0.42
MSH2-201ENST00000233146 PROKR2Q8NFJ6 384 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 BPIFCQ8NFQ6 507 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 TRIM43Q96BQ3 446 aaPredicted RBP12.42□□□□□ -0.42
MSH2-201ENST00000233146 THAP7Q9BT49 309 aaPredicted RBP12.42□□□□□ -0.42
MSH2-201ENST00000233146 FZD3Q9NPG1 666 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 GALPQ9UBC7 116 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 CPEP16870 476 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 NFYAP23511 347 aaPredicted RBP12.42□□□□□ -0.42
MSH2-201ENST00000233146 HOXC13P31276 330 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 TRHRP34981 398 aaPredicted RBP12.42□□□□□ -0.42
MSH2-201ENST00000233146 SCNN1AP37088 669 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 ACTR1BP42025 376 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 FOXK2Q01167 660 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 NCF4Q15080 339 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 DCAF15Q66K64 600 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 CBLL1Q75N03 491 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 LDB1Q86U70 411 aaPredicted RBP12.42□□□□□ -0.42
MSH2-201ENST00000233146 ZFP82Q8N141 532 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 BEST4Q8NFU0 473 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 OR14A16Q8NHC5 309 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 RFT1Q96AA3 541 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 FAM193BQ96PV7 902 aaPredicted RBP12.42□□□□□ -0.42
MSH2-201ENST00000233146 NT5C1AQ9BXI3 368 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 C11orf16Q9NQ32 467 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 MED11Q9P086 117 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 KLHL42Q9P2K6 505 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 LOC390937A0A1W2PQ73 354 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 FAM72CH0Y354 149 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 UBE2CO00762 179 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 MPZL2O60487 215 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 MSCO60682 206 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 RECKO95980 971 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 GNRH1P01148 92 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 URODP06132 367 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 ANXA8P13928 327 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 GABRA1P14867 456 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 HOXB9P17482 250 aaPredicted RBP12.42□□□□□ -0.42
MSH2-201ENST00000233146 AHCYP23526 432 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 KDELR2P33947 212 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 ADRA1AP35348 466 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 CHRNA4P43681 627 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 AGTR2P50052 363 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 CDC42P60953 191 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 RBBP4Q09028 425 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 C21orf62-AS1Q17RA5 79 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 C4orf46Q504U0 113 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 FAM72AQ5TYM5 149 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 PRAMEF13Q5VWM6 474 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 MEDAGQ5VYS4 303 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 RNLSQ5VYX0 342 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 RAET1GQ6H3X3 334 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 FAM72DQ6L9T8 149 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 FAM72BQ86X60 149 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 LNX2Q8N448 690 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 OR56A4Q8NGH8 313 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 DNAJB8Q8NHS0 232 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 PEX11GQ96HA9 241 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 TMEM41AQ96HV5 264 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 NIPSNAP1Q9BPW8 284 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 TRPS1Q9UHF7 1281 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 DMRT1Q9Y5R6 373 aa12.42□□□□□ -0.42
MSH2-201ENST00000233146 C5orf52A6NGY3 159 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 OAZ2O95190 189 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 HTR6P50406 440 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 DCDP81605 110 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms