RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 BPGMP07738 259 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 CPN2P22792 545 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 FOXK1P85037 733 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 TGM3Q08188 693 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 IFT88Q13099 833 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 SLC13A2Q13183 592 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 CEP85LQ5SZL2 805 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 C10orf62Q5T681 223 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-201ENST00000230480 LRIG3Q6UXM1 1119 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 ZCCHC23Q6ZST2 131 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 TRIM46Q7Z4K8 759 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 BEST3Q8N1M1 668 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 C1orf52Q8N6N3 182 aaKnown RBP12.8□□□□□ -0.36
VEGFA-201ENST00000230480 ZNF721Q8TF20 911 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 PPWD1Q96BP3 646 aaKnown RBP12.8□□□□□ -0.36
VEGFA-201ENST00000230480 CCDC126Q96EE4 140 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 PGM2Q96G03 612 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 ELOVL6Q9H5J4 265 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 VIPAS39Q9H9C1 493 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 COPS7BQ9H9Q2 264 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-201ENST00000230480 PNO1Q9NRX1 252 aaKnown RBP12.8□□□□□ -0.36
VEGFA-201ENST00000230480 SIRT5Q9NXA8 310 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 ADAM29Q9UKF5 820 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 SLC12A4Q9UP95 1085 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 B3GNT3Q9Y2A9 372 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 A0A088AWK7 358 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 A8MUI8 341 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 NPIPB8E9PQR5 432 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 ITM2AO43736 263 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 MYO1DO94832 1006 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 ENO1P06733 434 aaKnown RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 ICAM2P13598 275 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 S1PR1P21453 382 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 ZNF10P21506 573 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 HPDP32754 393 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 TNFSF10P50591 281 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 RAP1GDS1P52306 607 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 WDR4P57081 412 aaKnown RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 MLF1P58340 268 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 FOLH1Q04609 750 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 SRSF11Q05519 484 aaKnown RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 ACTN3Q08043 901 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 MGAT2Q10469 447 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 EXT1Q16394 746 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 ACER2Q5QJU3 275 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 TTC19Q6DKK2 380 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 CLEC6AQ6EIG7 209 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 GALNT18Q6P9A2 607 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 PRICKLE2Q7Z3G6 844 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 NUDT13Q86X67 352 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 HPS6Q86YV9 775 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 MDS2Q8NDY4 140 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 SIMC1Q8NDZ2 872 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 B3GNT7Q8NFL0 401 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 ADAMTS18Q8TE60 1221 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 NCLNQ969V3 563 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 SNRNP40Q96DI7 357 aaKnown RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 ZNF681Q96N22 645 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 SIGLEC12Q96PQ1 595 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 TAAR6Q96RI8 345 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 RNF32Q9H0A6 362 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 RPF2Q9H7B2 306 aaKnown RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 LIN28AQ9H9Z2 209 aaKnown RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 SSU72Q9NP77 194 aaKnown RBP12.79□□□□□ -0.36
VEGFA-201ENST00000230480 VPS29Q9UBQ0 182 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 SNX6Q9UNH7 406 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 PTPN13Q12923 2485 aa12.79□□□□□ -0.36
VEGFA-201ENST00000230480 DOPEY2Q9Y3R5 2298 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 NINQ8N4C6 2090 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 H3BQF6 201 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 CLDN4O14493 209 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 ULK1O75385 1050 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 NEURL1O76050 574 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 GPR75O95800 540 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 FGF4P08620 206 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 CT62P0C5K7 136 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 HSD3B1P14060 373 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 HSD3B2P26439 372 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 CD96P40200 585 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 ARL1P40616 181 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-201ENST00000230480 STT3AP46977 705 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 GTF3C1Q12789 2109 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 CSTF3Q12996 717 aaKnown RBP12.78□□□□□ -0.36
VEGFA-201ENST00000230480 DUSP8Q13202 625 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 ELAVL1Q15717 326 aaKnown RBP12.78□□□□□ -0.36
VEGFA-201ENST00000230480 INPP5JQ15735 1006 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-201ENST00000230480 ARL13AQ5H913 290 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-201ENST00000230480 KANK2Q63ZY3 851 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 ZNF324BQ6AW86 544 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-201ENST00000230480 EFCAB3Q8N7B9 438 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 TANKQ92844 425 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 TLCD1Q96CP7 247 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 VPS50Q96JG6 964 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 MAGEB10Q96LZ2 347 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-201ENST00000230480 HES7Q9BYE0 225 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 CDCP1Q9H5V8 836 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 TRIM45Q9H8W5 580 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-201ENST00000230480 KCNK13Q9HB14 408 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 ADAP2Q9NPF8 381 aa12.78□□□□□ -0.36
VEGFA-201ENST00000230480 LYARQ9NX58 379 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms