RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 OR6C74A6NCV1 312 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 SOX1O00570 391 aaPredicted RBP11.02□□□□□ -0.64
NOD1-201ENST00000222823 HMGB3O15347 200 aaKnown RBP11.02□□□□□ -0.64
NOD1-201ENST00000222823 RASAL1O95294 804 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 PLGP00747 810 aaPredicted RBP11.02□□□□□ -0.64
NOD1-201ENST00000222823 MT-ND5P03915 603 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 HSD11B1P28845 292 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 CST6Q15828 149 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 RASSF6Q6ZTQ3 369 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 AMIGO1Q86WK6 493 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 OR51A7Q8NH64 312 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 CNIH3Q8TBE1 160 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 ISL2Q96A47 359 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 MS4A4AQ96JQ5 239 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 LINC00597Q9H2U6 94 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 MCCC2Q9HCC0 563 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 LTBP1Q14766 1721 aa11.02□□□□□ -0.64
NOD1-201ENST00000222823 CCRL2O00421 344 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 MTRF1O75570 445 aaKnown RBP11.02□□□□□ -0.65
NOD1-201ENST00000222823 HOXD8P13378 290 aaPredicted RBP11.02□□□□□ -0.65
NOD1-201ENST00000222823 CHAF1BQ13112 559 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 NFE2L1Q14494 772 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 NIPAL1Q6NVV3 410 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 OR8J1Q8NGP2 316 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 CEP76Q8TAP6 659 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 GNPDA2Q8TDQ7 276 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 C15orf40Q8WUR7 153 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 SPATA9Q9BWV2 254 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 MOV10Q9HCE1 1003 aaKnown RBP11.02□□□□□ -0.65
NOD1-201ENST00000222823 MYOCOSA0A1B0GUC4 107 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 SMIM30A4D0T7 59 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 FAAHO00519 579 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 CSTAP01040 98 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 NTSR1P30989 418 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 RAB28P51157 221 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 RAB2AP61019 212 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 PUDPQ08623 228 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 PON2Q15165 354 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 INAVAQ3KP66 663 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 KIAA0319Q5VV43 1072 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 GALNT10Q86SR1 603 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 ARHGAP12Q8IWW6 846 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 PIANPQ8IYJ0 282 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 PTERQ96BW5 349 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 SLC30A2Q9BRI3 323 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 MTG2Q9H4K7 406 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 SDR39U1Q9NRG7 319 aaPredicted RBP11.02□□□□□ -0.65
NOD1-201ENST00000222823 IGSF5Q9NSI5 407 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 GRHPRQ9UBQ7 328 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 C19orf25Q9UFG5 118 aaPredicted RBP11.02□□□□□ -0.65
NOD1-201ENST00000222823 GNG8Q9UK08 70 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 F5P12259 2224 aa11.02□□□□□ -0.65
NOD1-201ENST00000222823 H0YJX3 145 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 SMAD6O43541 496 aaKnown RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 FGF4P08620 206 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 DRD2P14416 443 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 PFKLP17858 780 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 RPS26P62854 115 aaKnown RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 GSTM4Q03013 218 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 SEMA3BQ13214 749 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 KANK2Q63ZY3 851 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 JPH3Q8WXH2 748 aaPredicted RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 TTYH2Q9BSA4 534 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 EHD1Q9H4M9 534 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 PTGES2Q9H7Z7 377 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 ZNF639Q9UID6 485 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 ACSL6Q9UKU0 697 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 OR14I1A6ND48 311 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 METTL21EPA6NDL7 271 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 PEX12O00623 359 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 GABBR2O75899 941 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 CSN2P05814 226 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 ETFAP13804 333 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 CAPN3P20807 821 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 GDI2P50395 445 aaKnown RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 TAS2R43P59537 309 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 NPRL3Q12980 569 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 SNTA1Q13424 505 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 SMU1Q2TAY7 513 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 C18orf21Q32NC0 220 aaPredicted RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 SLC36A3Q495N2 470 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 C4orf46Q504U0 113 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 TMEM35AQ53FP2 167 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 SNX29P2Q8IUI4 249 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 CLECL1Q8IZS7 167 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 CBARPQ8N350 705 aaPredicted RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 METTL27Q8N6F8 245 aaPredicted RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 CD200R1Q8TD46 325 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 ZDHHC12Q96GR4 267 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 GPR174Q9BXC1 333 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 CNOT11Q9UKZ1 510 aaKnown RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 EXOSC1Q9Y3B2 195 aaKnown RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 SSC5DA1L4H1 1573 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 TCRBV21S2A2A0A5A6 115 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 TMEM189-UBE2V1I3L0A0 370 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 NME4O00746 187 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 HCRTR2O43614 444 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 SORBS2O94875 1100 aaKnown RBP11.01□□□□□ -0.65
NOD1-201ENST00000222823 HPRP00739 348 aa11.01□□□□□ -0.65
NOD1-201ENST00000222823 PENKP01210 267 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms