RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TECRLQ5HYJ1 363 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 KIAA1614Q5VZ46 1190 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 ATG9BQ674R7 924 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 CCSAPQ6IQ19 270 aaPredicted RBP18.15■□□□□ 0.5
SMPD3-201ENST00000219334 FTMTQ8N4E7 242 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 OR52P1PQ8NH57 321 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 MROQ9BYG7 248 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 DNAJC27Q9NZQ0 273 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 MED11Q9P086 117 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 A8MVJ9 347 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 VAMP1P23763 118 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 GGT2P36268 569 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 TNFRSF4P43489 277 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 UBE2NP61088 152 aaKnown RBP18.15■□□□□ 0.5
SMPD3-201ENST00000219334 CHCHD4Q8N4Q1 142 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 LMO3Q8TAP4 145 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 HPF1Q9NWY4 346 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 VNN3Q9NY84 501 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 GPRC5BQ9NZH0 403 aa18.15■□□□□ 0.5
SMPD3-201ENST00000219334 OR2AT4A6NND4 320 aa18.14■□□□□ 0.5
SMPD3-201ENST00000219334 ITIH1P19827 911 aa18.14■□□□□ 0.5
SMPD3-201ENST00000219334 RHDQ02161 417 aa18.14■□□□□ 0.5
SMPD3-201ENST00000219334 MALLQ13021 153 aa18.14■□□□□ 0.5
SMPD3-201ENST00000219334 GLT8D1Q68CQ7 371 aa18.14■□□□□ 0.5
SMPD3-201ENST00000219334 SHQ1Q6PI26 577 aaKnown RBP18.14■□□□□ 0.5
SMPD3-201ENST00000219334 WDTC1Q8N5D0 677 aa18.14■□□□□ 0.5
SMPD3-201ENST00000219334 OR8K5Q8NH50 307 aa18.14■□□□□ 0.5
SMPD3-201ENST00000219334 RADILQ96JH8 1075 aa18.14■□□□□ 0.5
SMPD3-201ENST00000219334 PMF1-BGLAPU3KQ54 211 aa18.14■□□□□ 0.5
SMPD3-201ENST00000219334 MYOM1P52179 1685 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 PTGR1Q14914 329 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 S100A16Q96FQ6 103 aaKnown RBP18.14■□□□□ 0.49
SMPD3-201ENST00000219334 SCGB1D2O95969 90 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 NUDT1P36639 197 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 SHC2P98077 582 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 GALK2Q01415 458 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 ST3GAL4Q11206 333 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 RCAN2Q14206 197 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 CDK10Q15131 360 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 TCEAL1Q15170 157 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 CES4AQ5XG92 561 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 ZNF761Q86XN6 746 aaPredicted RBP18.14■□□□□ 0.49
SMPD3-201ENST00000219334 HHIPQ96QV1 700 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 CDH10Q9Y6N8 788 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 LTN1O94822 1766 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 SLC33A1O00400 549 aaPredicted RBP18.14■□□□□ 0.49
SMPD3-201ENST00000219334 IRF2P14316 349 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 UGT3A2Q3SY77 523 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 C3orf33Q6P1S2 294 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 TSPAN33Q86UF1 283 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 KLHDC8AQ8IYD2 350 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 OR51A7Q8NH64 312 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 ZFYVE21Q9BQ24 234 aa18.14■□□□□ 0.49
SMPD3-201ENST00000219334 TRNAU1APQ9NX07 287 aaKnown RBP18.14■□□□□ 0.49
SMPD3-201ENST00000219334 UNC119BA6NIH7 251 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 ZNF806P0C7X5 589 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 ERMP1Q7Z2K6 904 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 C6orf120Q7Z4R8 191 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 OR2T33Q8NG76 320 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 OR8J3Q8NGG0 315 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 OR51G2Q8NGK0 314 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 BORCS6Q96GS4 357 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 NSUN5Q96P11 429 aaKnown RBP18.13■□□□□ 0.49
SMPD3-201ENST00000219334 ERVK-18Q9QC07 812 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 ABCD2Q9UBJ2 740 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 MON2Q7Z3U7 1717 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 GAS6Q14393 721 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 SF3B4Q15427 424 aaKnown RBP eCLIP18.13■□□□□ 0.49
SMPD3-201ENST00000219334 SLC22A4Q9H015 551 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 DCSTAMPQ9H295 470 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 ENTPD2Q9Y5L3 495 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 TMEM14AQ9Y6G1 99 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 CPNE6O95741 557 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 CEBPBP17676 345 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 PRKACGP22612 351 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 TM4SF4P48230 202 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 SIM1P81133 766 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-201ENST00000219334 NIPAL4Q0D2K0 466 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 SLC27A4Q6P1M0 643 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 LARP4Q71RC2 724 aaKnown RBP eCLIP18.13■□□□□ 0.49
SMPD3-201ENST00000219334 OR4N5Q8IXE1 308 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 SLC5A7Q9GZV3 580 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 TMX2-CTNND1H3BSU7 103 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 FAAHO00519 579 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 CNMDO75829 334 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 DEFB103AP81534 67 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 MANEALQ5VSG8 457 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 SNX29P2Q8IUI4 249 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 OR14L1PQ8NHC6 308 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 HUS1BQ8NHY5 278 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 THAP4Q8WY91 577 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 SLC7A6OSQ96CW6 309 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-201ENST00000219334 SGTBQ96EQ0 304 aa18.13■□□□□ 0.49
SMPD3-201ENST00000219334 XRN1Q8IZH2 1706 aaKnown RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 RTCAO00442 366 aaKnown RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 POLR1CO15160 346 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 RAD51DO75771 328 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 LRIT3Q3SXY7 679 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 ERI1Q8IV48 349 aaKnown RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 NLGN4XQ8N0W4 816 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms