RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CYS1Q717R9 158 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 LRRC70Q7Z2Q7 622 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 GPALPP1Q8IXQ4 340 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 MARVELD2Q8N4S9 558 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 PPM1NQ8N819 430 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 MORN4Q8NDC4 146 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 FAM76AQ8TAV0 307 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 ZNF473Q8WTR7 871 aaKnown RBP13.92□□□□□ -0.18
UPK3A-201ENST00000216211 OR8D2Q9GZM6 311 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 ROGDIQ9GZN7 287 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 LYRM4Q9HD34 91 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 VTI1BQ9UEU0 232 aa13.92□□□□□ -0.18
UPK3A-201ENST00000216211 A0A087WUV0 522 aaPredicted RBP13.91□□□□□ -0.18
UPK3A-201ENST00000216211 A0A0G2JMM0 328 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 A0A1W2PPB8 328 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 A0A1W2PRS3 328 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 FAM166BA8MTA8 275 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 KIR3DP1A8MWS1 328 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 C17orf105B2RV13 164 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 SUPT3HB4E1H0 165 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 G3V3Y1 287 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 UBXN8O00124 270 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 SAP18O00422 153 aaKnown RBP13.91□□□□□ -0.18
UPK3A-201ENST00000216211 SUPT3HO75486 399 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 TGFB1P01137 390 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 POU3F2P20265 443 aaPredicted RBP13.91□□□□□ -0.18
UPK3A-201ENST00000216211 ATP5A1P25705 553 aaKnown RBP13.91□□□□□ -0.18
UPK3A-201ENST00000216211 CASP2P42575 452 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 HK2P52789 917 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 PPIAP62937 165 aaKnown RBP13.91□□□□□ -0.18
UPK3A-201ENST00000216211 PLGLB1Q02325 96 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 E2F2Q14209 437 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 TBCCQ15814 346 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 ZNF750Q32MQ0 723 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 TNFAIP8L3Q5GJ75 292 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 ISCA2Q86U28 154 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 RNF175Q8N4F7 328 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 ACOT4Q8N9L9 421 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 SRFBP1Q8NEF9 429 aaKnown RBP13.91□□□□□ -0.18
UPK3A-201ENST00000216211 OR2M7Q8NG81 312 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 OR14A16Q8NHC5 309 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 STAG3L4Q8TBR4 150 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 SLC2A12Q8TD20 617 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 FBF1Q8TES7 1133 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 CA5BP1Q8WTZ4 195 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 TLCD1Q96CP7 247 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 TBCDQ9BTW9 1192 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 PLSCR2Q9NRY7 297 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 COQ3Q9NZJ6 369 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 NUDT4Q9NZJ9 180 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 ADAM21Q9UKJ8 722 aa13.91□□□□□ -0.18
UPK3A-201ENST00000216211 CELSR1Q9NYQ6 3014 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 ZNF354AO60765 605 aaPredicted RBP13.9□□□□□ -0.18
UPK3A-201ENST00000216211 SLC35E2BP0CK96 405 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 HIST1H1TP22492 207 aaPredicted RBP13.9□□□□□ -0.18
UPK3A-201ENST00000216211 CPN2P22792 545 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 SSR2P43308 183 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 RNF4P78317 190 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 SERTAD2Q14140 314 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 AP5B1Q2VPB7 878 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 MED27Q6P2C8 311 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 ARHGAP11AQ6P4F7 1023 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 TBC1D1Q86TI0 1168 aaPredicted RBP13.9□□□□□ -0.18
UPK3A-201ENST00000216211 RPRMLQ8N4K4 120 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 UHMK1Q8TAS1 419 aaKnown RBP13.9□□□□□ -0.18
UPK3A-201ENST00000216211 UBE2E3Q969T4 207 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 ANKRD9Q96BM1 317 aaPredicted RBP13.9□□□□□ -0.18
UPK3A-201ENST00000216211 ATOH8Q96SQ7 321 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 SORBS1Q9BX66 1292 aaKnown RBP13.9□□□□□ -0.18
UPK3A-201ENST00000216211 STMN4Q9H169 189 aaPredicted RBP13.9□□□□□ -0.18
UPK3A-201ENST00000216211 PPCSQ9HAB8 311 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 NMRAL1Q9HBL8 299 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 OPTCQ9UBM4 332 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 SPACA6W5XKT8 324 aa13.9□□□□□ -0.18
UPK3A-201ENST00000216211 K7EPI3 171 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 RGS16O15492 202 aaPredicted RBP13.89□□□□□ -0.19
UPK3A-201ENST00000216211 FGF17O60258 216 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 KERAO60938 352 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 ETHE1O95571 254 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 LTA4HP09960 611 aaKnown RBP13.89□□□□□ -0.19
UPK3A-201ENST00000216211 SSTR2P30874 369 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 PHBP35232 272 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 GYS2P54840 703 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 KRTAP10-9P60411 292 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 DDX39BQ13838 428 aaKnown RBP13.89□□□□□ -0.19
UPK3A-201ENST00000216211 TMEM35AQ53FP2 167 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 EMC4Q5J8M3 183 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 TMEM211Q6ICI0 200 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 MEX3BQ6ZN04 569 aaKnown RBP13.89□□□□□ -0.19
UPK3A-201ENST00000216211 CHSY3Q70JA7 882 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 OR4N5Q8IXE1 308 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 LAS2Q8IYD9 372 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 OR7G3Q8NG95 312 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 EPS8L3Q8TE67 593 aaKnown RBP13.89□□□□□ -0.19
UPK3A-201ENST00000216211 ZNF721Q8TF20 911 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 UBTD2Q8WUN7 234 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 NXNL1Q96CM4 212 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 CMTM7Q96FZ5 175 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 SCYL1Q96KG9 808 aa13.89□□□□□ -0.19
UPK3A-201ENST00000216211 SPOCK3Q9BQ16 436 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms