RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ATP13A2Q9NQ11 1180 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 UTS2RQ9UKP6 389 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 PTRH2Q9Y3E5 179 aaKnown RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 FMN2Q9NZ56 1722 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 HCRTR2O43614 444 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 LCATP04180 440 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 POLR2CP19387 275 aaPredicted RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 HTR2AP28223 471 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 PPP5CP53041 499 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 SLC3A1Q07837 685 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 SMAGPQ0VAQ4 97 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 UNQ9370/PRO34162Q6UXP9 181 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 CLEC17AQ6ZS10 378 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 ZNF695Q8IW36 515 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 RBM4BQ9BQ04 359 aaKnown RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 CRB3Q9BUF7 120 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 RBM4Q9BWF3 364 aaKnown RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 SLC6A16Q9GZN6 736 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 IL23AQ9NPF7 189 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 DNAJB4Q9UDY4 337 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 SRPK3Q9UPE1 567 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 TMEM14AQ9Y6G1 99 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 ARHGEF5Q12774 1597 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 PRAMEF33A0A0G2JMD5 474 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 E5RJQ4 531 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 FOXN3O00409 490 aaPredicted RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 WNT10BO00744 389 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 ORC5O43913 435 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 PRAMEF10O60809 474 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 CCNCP24863 283 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 SUB1P53999 127 aaKnown RBP eCLIP3.32□□□□□ -1.88
NEB-201ENST00000172853 PPP4CP60510 307 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 DSTNP60981 165 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 PDK4Q16654 411 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.32□□□□□ -1.88
NEB-201ENST00000172853 LSM14AQ8ND56 463 aaKnown RBP3.32□□□□□ -1.88
NEB-201ENST00000172853 S1PR3Q99500 378 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 MROH2AA6NES4 1674 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 KIF1AQ12756 1690 aa3.32□□□□□ -1.88
NEB-201ENST00000172853 MAGEB17A8MXT2 336 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 J3QRK9 145 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 SSX5O60225 188 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 BGNP21810 368 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 NCS1P62166 190 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 GTF2H2Q13888 395 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 DCST2Q5T1A1 773 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 AKR1C8PQ5T2L2 129 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 TRNP1Q6NT89 227 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 RPL13AP3Q6NVV1 102 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 GTF2H2CQ6P1K8 395 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 ZNF585AQ6P3V2 769 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 TRIM46Q7Z4K8 759 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 ACER1Q8TDN7 264 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 ELOVL7A1L3X0 281 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 FAM170BA6NMN3 283 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 CHADO15335 359 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 TSPAN6O43657 245 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 NRP2O60462 931 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 HNRNPLP14866 589 aaKnown RBP eCLIP3.31□□□□□ -1.88
NEB-201ENST00000172853 ZNF45Q02386 682 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 OPN5Q6U736 354 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 CES3Q6UWW8 571 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 SERPINA12Q8IW75 414 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 KDM1BQ8NB78 822 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 LRRN4Q8WUT4 740 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 SUV39H2Q9H5I1 410 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 NSG1A0A0A6YYJ2 146 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 MAFO75444 373 aaPredicted RBP3.31□□□□□ -1.88
NEB-201ENST00000172853 PAGE1O75459 146 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 IFNA17P01571 189 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 SERPINF1P36955 418 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 PBX3P40426 434 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 ATP1B3P54709 279 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 CLVS2Q5SYC1 327 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 KCTD9Q7L273 389 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 PIWIL3Q7Z3Z3 882 aaKnown RBP3.31□□□□□ -1.88
NEB-201ENST00000172853 EDAQ92838 391 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 MAELQ96JY0 434 aaKnown RBP3.31□□□□□ -1.88
NEB-201ENST00000172853 TSSK2Q96PF2 358 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 DUSP9Q99956 384 aaKnown RBP3.31□□□□□ -1.88
NEB-201ENST00000172853 TSPAN10Q9H1Z9 355 aaPredicted RBP3.31□□□□□ -1.88
NEB-201ENST00000172853 KLHL9Q9P2J3 617 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 ERVK-19Q9WJR5 959 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 ZNF142P52746 1687 aaPredicted RBP3.31□□□□□ -1.88
NEB-201ENST00000172853 SIGLEC1Q9BZZ2 1709 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 VILLO15195 856 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 BUD23O43709 281 aaKnown RBP3.31□□□□□ -1.88
NEB-201ENST00000172853 KIAA0513O60268 411 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 TMEM225BP0DP42 221 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 G6PDP11413 515 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 VAMP1P23763 118 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 GRIA3P42263 894 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 VARS2Q5ST30 1063 aaKnown RBP3.31□□□□□ -1.88
NEB-201ENST00000172853 SDHAF4Q5VUM1 108 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 Q6ZSR6 202 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 LGALS12Q96DT0 336 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 ITPKCQ96DU7 683 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 IP6K3Q96PC2 410 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 SNX18Q96RF0 628 aa3.31□□□□□ -1.88
NEB-201ENST00000172853 TBC1D17Q9HA65 648 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms