RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ADGRF3Q8IZF5 1079 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 MINDY2Q8NBR6 621 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 OR10G2Q8NGC3 310 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 OR5M11Q96RB7 305 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 CDADC1Q9BWV3 514 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 C1GALT1Q9NS00 363 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 MS4A12Q9NXJ0 267 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 DUSP12Q9UNI6 340 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 PCDHGB3Q9Y5G1 929 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 OR1F1O43749 312 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 RSBN1Q5VWQ0 802 aaPredicted RBP12.5□□□□□ -0.41
CTNS-201ENST00000046640 CAMKMTQ7Z624 323 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 SLC9B2Q86UD5 537 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 OR8H2Q8N162 312 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 PGBD3Q8N328 593 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 OR52N2Q8NGI0 321 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 PLA2G2FQ9BZM2 168 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 IMPAD1Q9NX62 359 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 KLHL20Q9Y2M5 609 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 TRIOO75962 3097 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 CLDN24A6NM45 220 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 RB1P06400 928 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 AZGP1P25311 298 aaKnown RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 PTX3P26022 381 aaPredicted RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 DRD3P35462 400 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 OPRD1P41143 372 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 MANFP55145 182 aaKnown RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 C21orf58P58505 322 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 TAS2R38P59533 333 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 PIP5KL1Q5T9C9 394 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 PSRC1Q6PGN9 363 aaPredicted RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 CEACAM20Q6UY09 585 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 PDZD3Q86UT5 571 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 GATAD2AQ86YP4 633 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 LGI4Q8N135 537 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 IPCEF1Q8WWN9 437 aaPredicted RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 FERD3LQ96RJ6 166 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 KXD1Q9BQD3 176 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 MMP27Q9H306 513 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 FZD3Q9NPG1 666 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 PSORS1C1Q9UIG5 152 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 CORO2BQ9UQ03 480 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 HSPE1-MOB4S4R3N1 261 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 OR52A4PA6NMU1 304 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 C1QTNF3-AMACRE9PGA6 284 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 LCMT2O60294 686 aaKnown RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 KAT7O95251 611 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 RPLP0P05388 317 aaKnown RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 BCHEP06276 602 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 KELP23276 732 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 PPIBP23284 216 aaKnown RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 GJA4P35212 333 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 DPTQ07507 201 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 TEAD4Q15561 434 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 TSTQ16762 297 aaKnown RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 LRIT3Q3SXY7 679 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 IFI44LQ53G44 452 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 FAHD1Q6P587 224 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 TRIM40Q6P9F5 258 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 LRRTM4Q86VH4 590 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 FAM129CQ86XR2 697 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 DNAJC22Q8N4W6 341 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 AMER2Q8N7J2 671 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 ZNF514Q96K75 400 aaPredicted RBP12.49□□□□□ -0.41
CTNS-201ENST00000046640 HRASLS5Q96KN8 279 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 TPK1Q9H3S4 243 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 DPEP2Q9H4A9 486 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 GPR34Q9UPC5 381 aa12.49□□□□□ -0.41
CTNS-201ENST00000046640 CLCA1A8K7I4 914 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 AP3D1O14617 1153 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 NME6O75414 186 aaPredicted RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 ADRA2AP08913 450 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 ADORA3P0DMS8 318 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 FEN1P39748 380 aaKnown RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 MAPK9P45984 424 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 TGM4P49221 684 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 DAB2P98082 770 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 SPDYE7PQ495Y7 208 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 UBE2UQ5VVX9 321 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 THOC7Q6I9Y2 204 aaKnown RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 VITQ6UXI7 678 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 USP43Q70EL4 1123 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 GDPD3Q7L5L3 318 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 DCUN1D3Q8IWE4 304 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 KLHDC8AQ8IYD2 350 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 CYP4Z2PQ8N1L4 340 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 KRT78Q8N1N4 520 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 FBXO15Q8NCQ5 510 aaPredicted RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 MYDGFQ969H8 173 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 CEP19Q96LK0 163 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 DMRTB1Q96MA1 342 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 C12orf66Q96MD2 445 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 IL4I1Q96RQ9 567 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 RPP25Q9BUL9 199 aaKnown RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 TP63Q9H3D4 680 aaPredicted RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 MYNNQ9NPC7 610 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 WBP1LQ9NX94 342 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 TEX10Q9NXF1 929 aaPredicted RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 C17orf113A0A1B0GUU1 675 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms