RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CTAGE3PQ8IX95 158 aa14.69□□□□□ -0.06
ERCC1-201ENST00000013807 CENPLQ8N0S6 344 aaPredicted RBP14.69□□□□□ -0.06
ERCC1-201ENST00000013807 SLC15A4Q8N697 577 aa14.69□□□□□ -0.06
ERCC1-201ENST00000013807 RND1Q92730 232 aa14.69□□□□□ -0.06
ERCC1-201ENST00000013807 OPTCQ9UBM4 332 aa14.69□□□□□ -0.06
ERCC1-201ENST00000013807 RNF6Q9Y252 685 aa14.69□□□□□ -0.06
ERCC1-201ENST00000013807 ACOT9Q9Y305 439 aa14.69□□□□□ -0.06
ERCC1-201ENST00000013807 UTP11Q9Y3A2 253 aaKnown RBP14.69□□□□□ -0.06
ERCC1-201ENST00000013807 AKAP9Q99996 3911 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 SYCE1LA8MT33 242 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 H0YIV9 168 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 RTCAO00442 366 aaKnown RBP14.68□□□□□ -0.06
ERCC1-201ENST00000013807 FGF17O60258 216 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 FAM155BO75949 473 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 PDE9AO76083 593 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 TOXO94900 526 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 COX7A2P14406 83 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 TNNI3P19429 210 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 CPN2P22792 545 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 STX2P32856 288 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 GMPRP36959 345 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 PLTPP55058 493 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 SLAMF1Q13291 335 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 TESK1Q15569 626 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 MRM1Q6IN84 353 aaKnown RBP14.68□□□□□ -0.06
ERCC1-201ENST00000013807 ZDHHC24Q6UX98 284 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 ZNF572Q7Z3I7 529 aaPredicted RBP14.68□□□□□ -0.06
ERCC1-201ENST00000013807 CMC1Q7Z7K0 106 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 DND1Q8IYX4 353 aaKnown RBP14.68□□□□□ -0.06
ERCC1-201ENST00000013807 FAM109AQ8N4B1 249 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 PPM1NQ8N819 430 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 HUS1BQ8NHY5 278 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 RGMAQ96B86 450 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 FBXL20Q96IG2 436 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 ZNF717Q9BY31 904 aaPredicted RBP14.68□□□□□ -0.06
ERCC1-201ENST00000013807 RAB17Q9H0T7 212 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 DEFB127Q9H1M4 99 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 RPF2Q9H7B2 306 aaKnown RBP14.68□□□□□ -0.06
ERCC1-201ENST00000013807 SACM1LQ9NTJ5 587 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 COPS7AQ9UBW8 275 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 PCDHGA11Q9Y5H2 935 aa14.68□□□□□ -0.06
ERCC1-201ENST00000013807 ANKHD1Q8IWZ3 2542 aaKnown RBP14.68□□□□□ -0.06
ERCC1-201ENST00000013807 MTORP42345 2549 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 A0A0G2JMM0 328 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 A0A1W2PPB8 328 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 A0A1W2PRS3 328 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 HMX2A2RU54 273 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 KIR3DP1A8MWS1 328 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 FOXO6A8MYZ6 492 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 UBXN8O00124 270 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 PLPP1O14494 284 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 AQP7O14520 342 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 BCKDKO14874 412 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 PROM1O43490 865 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 PTX3P26022 381 aaPredicted RBP14.67□□□□□ -0.06
ERCC1-201ENST00000013807 GALNSP34059 522 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 SSR2P43308 183 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 KRTAP10-9P60411 292 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 CUL3Q13618 768 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 SETDB1Q15047 1291 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 ACAP2Q15057 778 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 PCBP2Q15366 365 aaKnown RBP eCLIP14.67□□□□□ -0.06
ERCC1-201ENST00000013807 SPRED3Q2MJR0 410 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 ADGRD1Q6QNK2 874 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 LYPD8Q6UX82 237 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 MEX3BQ6ZN04 569 aaKnown RBP14.67□□□□□ -0.06
ERCC1-201ENST00000013807 RAPH1Q70E73 1250 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 TRILQ7L0X0 811 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 GPR180Q86V85 440 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 ST13P4Q8IZP2 240 aaPredicted RBP14.67□□□□□ -0.06
ERCC1-201ENST00000013807 TMEM251Q8N6I4 163 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 FBF1Q8TES7 1133 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 PAQR8Q8TEZ7 354 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 NXNL1Q96CM4 212 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 RBM18Q96H35 190 aaKnown RBP14.67□□□□□ -0.06
ERCC1-201ENST00000013807 ART5Q96L15 291 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 OR51B5Q9H339 312 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 DDX31Q9H8H2 851 aaKnown RBP14.67□□□□□ -0.06
ERCC1-201ENST00000013807 DMRT3Q9NQL9 472 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 NPDC1Q9NQX5 325 aaPredicted RBP14.67□□□□□ -0.06
ERCC1-201ENST00000013807 PHF11Q9UIL8 331 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 ATG4BQ9Y4P1 393 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 PCDHGB3Q9Y5G1 929 aa14.67□□□□□ -0.06
ERCC1-201ENST00000013807 MPDZO75970 2070 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 A0A087X1B8 175 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 MYOCOSA0A1B0GUC4 107 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 NADKO95544 446 aaPredicted RBP14.66□□□□□ -0.06
ERCC1-201ENST00000013807 C2P06681 752 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 PCNAP12004 261 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 ACVR2AP27037 513 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 MSX1P28360 303 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 TLX1P31314 330 aaPredicted RBP14.66□□□□□ -0.06
ERCC1-201ENST00000013807 MAGEA5P43359 124 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 ALDH18A1P54886 795 aaKnown RBP14.66□□□□□ -0.06
ERCC1-201ENST00000013807 TNFRSF17Q02223 184 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 PLGLB1Q02325 96 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 PMPCAQ10713 525 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 TRADDQ15628 312 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 FAM83EQ2M2I3 478 aa14.66□□□□□ -0.06
ERCC1-201ENST00000013807 SLC22A10Q63ZE4 541 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms